Setaria viridis (green foxtail): 117843722
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Entry
117843722 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20222
importin-5
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117843722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117843722
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117843722
Pre-60S particles
117843722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
HEAT_2
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
IFRD
RIX1
INTS7_N
MMS19_C
Adaptin_N
Arm
Cnd1
HEAT_Maestro
TPR_TNPO3_IPO13_3rd
Htt_N-HEAT_1
ARM_ARMC5
HEAT_GCN1
PPP2R1A-like_HEAT
Phasin_2
Motif
Other DBs
NCBI-GeneID:
117843722
NCBI-ProteinID:
XP_034580291
LinkDB
All DBs
Position
2:complement(42655905..42664135)
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AA seq
1126 aa
AA seq
DB search
MASAEDQAAAAALLGGDPAAFDGLLSTLMSSSNTDRSAAEAAFHRLRASHPEPLALRLAS
SLASPATAADLRAMAGVLLRKVLSPTPSSDASANNASPPAPLWPQLSLAGQSALKAHLLS
ALQSDPPKPIAKKVCDAISELAASLLPENAWAELLPFLFRAASGPEAPNLQESALLIFAR
LADYIAESLLDHLMTIHNLLAAALAHPTSPDVRIAALGAAVNLVQCLPTNADRDKMQDLL
PAMMRALTDCLNSGQEASAQEALELLVELAGAEPRFLRRQIADVVGAMLQVAEAAQLEDG
TRHLAVEFVITLAEARERAPGMMRRLPQFVGRLFAVLMQMLLDVEDDPAWHSAETEDEDA
GEGNNYGVAQECLDRLAIAIGGNAIVPIASELLPQYLSAPEWQKHHAALITLAQIAEGCA
KVMLKNLEQVVSMILNGFQHPHPRVRWAAINAIGQLSTDLGPDLQVHYHQKVLPALANAM
DDFQNPRVQAHAASAILNFSENCTPEILTPYLDGIVNKLLVLLQNGKQMVQEGALTALAS
VADSSQEHFKKYYDAVMPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKDKFRDDAR
QVMEVLMALQGTPMETDDPITSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDV
TITSAESDDEIESDDDSIETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFFPWI
DQVAPTLVPLLKFYFHEEVRRAAVAAMPELLRSAKLAVEKGQAQGRDESYVKQLSDYVIP
ALVEALHKEPETEMCSSMLDSLNECMQLSGRLLDETQVRAISDEIKNVIIASATRKRERT
ERTKAEDFDADEGELLKEENEQEEEVFDQVSECLGTLIKTFKASFLPFFDELSVYITPML
GKDKTPEERRIAICIFDDVAEQCRESALRYYDTYLPFLLEAANDENSDVRQAAVYGVGVC
AEFGGHVFRPLVGEALSKLNNVIRHPEARLPDNIMAYDNAVSALGKICQFHRDGIDAAQV
IPAWLSCLPIKDDKIEAKVVHEQLCSMVERSDGEILGPQNQYLLKIISIFAEVLCPGTEL
ATDETKNKMVNILRRFQQTLPPDFLASTFSNLQPQQQLLLQSILST
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccgaggaccaggccgcggccgccgcgctgctggggggcgacccggcggcg
ttcgacgggctgctgtcgaccctcatgtcgtcctccaacaccgaccgctccgccgccgag
gccgccttccaccgcctccgggcctcccacccggagcccctcgcgctgcggctcgcctca
tcgctcgcgtcgcccgccaccgccgccgacctccgcgccatggcgggggtcctgctccgc
aaggtcctctccccgaccccgtcctccgacgcgtccgccaacaacgcctcgcccccggcg
ccgctctggccgcagctctccctcgccggccagtccgcgctcaaggcgcacctcctctcc
gcgctccagtccgatccccccaagcccatcgccaagaaggtctgcgatgccatctccgag
ctcgctgcctcgctgctgcccgagaacgcctgggccgagctgctgcccttcctcttccgc
gccgcgtcggggcccgaggcgcccaaccttcaggagtcggcgctgcttatcttcgcgagg
ctggcggattacatcgctgaatcgctcctcgaccatctgatgactatccacaacctgctc
gccgccgctctggcgcaccccacatcccctgatgtgcgtattgcggccctgggtgccgca
gtcaacctcgtccagtgcctgccaaccaacgccgatcgggataagatgcaggatttgctc
ccggctatgatgagggcgctcacggattgcctgaactctggccaggaggcctcggcgcag
gaggcgctggagctgctcgttgagctggctggcgcagagccaaggttcctacggaggcag
attgcggacgtggtgggagcaatgctacaagttgctgaggctgcacagctggaagatggg
accaggcacttggcggttgagtttgtcattactcttgctgaggcaagggagcgtgcaccg
ggaatgatgcgtcgactcccgcagtttgtcggcaggctgtttgcagtgctaatgcagatg
ctgcttgatgtcgaggatgaccctgcttggcactctgctgaaaccgaagatgaggatgca
ggtgaagggaacaactatggagtggcacaggagtgccttgaccgccttgccatcgccatt
ggtggaaatgcaattgtgccaattgcatctgagctgcttccacagtacctgtctgctcct
gagtggcagaagcaccatgctgcgctcataacactcgcacagattgcggaaggatgtgca
aaggttatgcttaaaaatttggaacaagttgtctcgatgatattgaatgggttccaacat
cctcacccacgtgtgagatgggctgcaatcaatgccattggtcagctctctacggatttg
ggcccagacttgcaagttcattaccaccagaaagtgttgcctgcattggcgaacgctatg
gatgatttccagaacccacgagttcaggcacatgctgcatctgcgatcctgaacttcagt
gagaactgtacaccggaaattttgacaccttacctggatggaatcgtcaacaaattactt
gtccttcttcagaatggcaagcaaatggtgcaagagggagcattgacagccctagcttca
gtggcagattcatcacaggagcacttcaagaaatactatgatgctgtcatgccataccta
aaagctattttgatgaatgcaactgacaagtctaataggatgctccgtgccaagtccatg
gagtgtattagtttggtaggaatggctgtgggtaaggacaagttcagagacgacgcgagg
caggttatggaagtacttatggctttgcaaggaacaccaatggaaactgatgatccaatt
accagctacatgttgcaggcttgggccaggctatgcaaatgtcttgggcaggatttcctt
ccttacatgagtgttgttatgccaccattgcttcagtctgctcagctgaagcccgatgtg
acaattacttcagccgaatcagatgacgaaatagaatcagatgacgatagcattgaaaca
atcacacttggtgacaagagaataggaatccgaactagtgtgctggaagagaaagcaaca
gcttgcaacatgctgtgctgttatgctgatgagcttaaggagggtttcttcccatggatt
gatcaggttgcccccacgttggtccctctgctgaagttttacttccatgaagaagtcaga
agagctgctgttgcggcaatgccggaactcttacgttcggcaaagttggctgttgagaaa
ggacaggctcaaggccgtgacgagtcttatgttaaacagttgtctgactacgtaattcca
gctcttgttgaagcacttcacaaggagccagaaacagaaatgtgctcatccatgctggac
tcattaaatgagtgcatgcagctttctggtcgtttgctcgatgaaacccaagtacgagct
atttcggatgagattaaaaatgtcattatagccagcgcaaccaggaaaagggaacgtaca
gaaagaacaaaagcggaagattttgatgctgatgaaggagagctactcaaagaagagaat
gaacaggaggaggaagtatttgatcaggtcagcgagtgccttggtactttgattaaaacc
ttcaaagcttctttcttgccgttctttgatgagctctctgtgtacattacgccaatgttg
ggaaaagataaaacacccgaggagagaaggatagctatctgtatctttgatgatgttgcg
gagcaatgccgtgaatcagctttgaggtattatgatacataccttcctttccttttggag
gcagcaaacgatgaaaattcagatgtccggcaggctgctgtctatggtgtgggtgtatgt
gctgagtttggtggtcatgtttttcgccctctagttggagaggccctatcaaagttaaac
aatgttatccgacatcctgaagcacgacttccagacaatattatggcctatgacaatgct
gtttcggcacttggaaaaatatgtcaatttcatcgggatggcattgacgcggcccaggtt
attccagcatggcttagttgcttgcctataaaagatgataagattgaagctaaagttgta
catgagcaactttgctcaatggtggagaggtcggatggagaaattcttggccctcagaat
cagtatcttctgaaaattatttcaatatttgcagaggttttgtgccctgggacagagctt
gctacagatgaaacaaaaaacaagatggtcaatatcttgaggcgattccagcagacttta
cctccagattttctcgcgtcaacattttccaacttgcaaccgcagcagcagctcctgcta
cagtccatcttatcgacatag
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