Setaria viridis (green foxtail): 117843730
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Entry
117843730 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117843730
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117843730
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117843730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-RING_Vps41
zf-RING-like
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
117843730
NCBI-ProteinID:
XP_034580306
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Position
1:34381515..34383157
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AA seq
402 aa
AA seq
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MRLLPPVMNTLPPPTPPAAGDPFAATLPPSLPSPPPPSSSSSLNLSPSLLIIAALLAFVF
CASVSIHLLLRCLARASSSSHPSPSPFQAARARRASDAEAEEVGAGSARRSAAAVGPEEA
QAAEVDDEKERLIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHA
ACVDAWLRTTPSCPLCRAAVSLPHPPLPTAAPAAAAAGPGAQEPLDSRVGGSSNNSRSFR
VEIGSVSNRRSSAAGDDRRTYSLGSFDYRVDEEVEAVVSRITRPAVSAAAAKSAAQQAVP
ATPVEALAEAAGSRGWLREYVDRLASSASSLSGRWSARWSQGHHSARWSQGHGHHSRNHS
QSHRQEDSWRWDPEAAAGAAMHRAPDEEEPGFVALYRWIVGV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctccccccggtcatgaacaccctcccgccgcccacgccgccggccgccggc
gacccgttcgcggccacccttccgccgtcattgccgtcgccgcccccgccgtcctcgtcg
tcgtcgctcaacctctcgccctcgctgctcatcatcgccgcgctgctggcgttcgtcttc
tgcgcctccgtgtcgatccacctgctcctccgctgcctcgcccgcgcgtcgtcgtcgtcg
cacccgtccccgagcccgttccaggcggccagggcgcgccgcgcgtccgacgcggaggcg
gaggaggtgggggcggggtcggcgaggaggagcgcggcggcggtggggccggaggaggct
caggccgcggaggtggacgatgagaaggagcggctgatcgcgtcgctgccgcttttcacc
atggcgtcggcgctggcggcgctgcccaagagctccccggactgcgccgtctgcctctcg
cccttctcccccgacgccgagctgcggctgctcccggcgtgccggcacgcgttccacgcc
gcctgcgtcgacgcctggctccgcaccaccccatcgtgcccgctctgccgcgccgccgtc
tcgctcccgcacccgccgctccccaccgccgcgcccgccgccgccgccgcggggccgggc
gcgcaggagccgctggactcgcgggtcggcggcagcagcaacaactcgaggagcttccgc
gtcgagatcggcagcgtgagcaaccgccgctcctccgccgcgggtgacgaccgccgcacc
tactcgctgggctccttcgactaccgcgtcgacgaggaggtcgaggccgtggtgtcccgc
atcacccgccccgcggtctcggctgcggcggccaagtcggcggcccagcaggccgtgccg
gcgacccccgtcgaggcgctggcggaggcggcggggtcccgcgggtggctgcgcgagtac
gtcgaccgcctcgcctcctcggcctcctccctctccgggcggtggagcgcgcggtggagc
cagggacaccacagcgcgcggtggagccagggccacggccaccacagccgcaaccacagc
cagagccaccggcaggaggactcgtggcggtgggaccccgaggcggcggcgggggcggcg
atgcaccgcgcgccggacgaggaggagccggggttcgtggccctgtaccgttggatcgtc
ggggtatag
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