Setaria viridis (green foxtail): 117843741
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Entry
117843741 CDS
T07951
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117843741
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117843741
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117843741
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
117843741
NCBI-ProteinID:
XP_034580321
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Position
2:complement(37169866..37174338)
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AA seq
616 aa
AA seq
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MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSADVIMAEGYEAFV
SCNRSAKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLHDYARNSEILGDFVIAT
PVAEEGLGEITREDLLRVDNEGRCIITDHGHFVLFNIYGPAVEEDDKERVRFKLLFYKIL
QKRWEYLLALGKRVFVVGDLNIAPASIDRCDALPGFEKQMFREWLRSMLREHGGPFFDAF
RSKHPERTGAYTCFNQKIGAEEYNYGSRIDHILISGACLHHCNAVEDHSIFCCHVEECEI
MNHFKRGNSESLSKWKGGRSSKLEGSDHIPVYILLKEIPELPVHNIPPSAARYLPEVRGR
QQSIVSFFNKGKTYELQDDGNLVLSENTVNGSYYSDGLEKKAIVKEGLAAGITDLTKGGN
LPSLMCKGTNPDQWRNEGLSGVSYNSQKTSPSGTKSVPNKKLKRNLSSQPTIKSFFQQPG
PKTVNVSISTLVTPVETVHHTNQTCVPNDDSLPENMQCTTSAAEDQDNTNIPSCSISTDK
SNAAALEWQRIQQKMKMTLPRCKGHREPCIPRSVKKGPNIGRLFYVCPRAQGPASNKEAN
CGHFQWAPVKSKEKRL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcgggtggcgcagcacggg
tcgctccgccgcctcctcgacgccctcgacgccgacatcatctgcttccaggagaccaaa
ttgtcgaggcaggacctgtctgcagatgtcataatggctgaaggatacgaggcttttgtt
tcgtgcaatcgctctgctaaagggcgtggagcatactctggtgttgcaacattttgccga
gtaacatcagcattttccagccaggaggttgctttgccagtagcagctgaagaaggcttt
actggacttcacgactatgcaagaaacagcgaaattttgggggattttgttattgcaact
cctgtagcggaggagggccttggtgaaatcacaagagaagacctgctaagggtagacaat
gaggggcggtgcatcatcaccgatcacggacattttgttcttttcaacatatatggccca
gctgtcgaagaagatgataaagagcgggttcgttttaagctactattttataagatactg
cagaaacgatgggaatatctgctggcacttggaaagagagtctttgttgttggtgatttg
aatattgctcctgcttcaatagataggtgtgatgcgctgcctggttttgagaagcaaatg
ttccgagaatggctgagatccatgctgagagaacatggaggtccctttttcgatgctttt
agatcgaaacaccctgaaaggacaggagcatatacttgttttaatcaaaaaattggtgct
gaagagtataattacggttctagaatagaccacattctcatttccggcgcctgtctccat
cattgcaatgctgtggaggatcatagcattttttgttgccatgtagaagaatgtgagata
atgaatcatttcaaaagagggaattctgaaagtttgtcaaagtggaaaggggggagaagt
agtaagctagaaggatccgatcatattccagtttatattttactgaaagaaattcctgaa
cttccagttcataatatcccaccatcagctgcaagatatcttccagaggtccgtggacga
cagcagagtattgtatcattcttcaataaggggaaaacttatgagctgcaagatgatgga
aatttggttctgtctgagaatacagtaaatggtagctactatagtgatggcttggaaaag
aaagctatagttaaggaaggactggcagctggtataactgatcttacaaaaggtggtaac
cttcctagtttgatgtgtaaggggacaaatcctgatcaatggagaaatgaaggattaagt
ggcgtctcctataacagccagaaaacttcaccgtctggcaccaagtctgtgccaaacaag
aagcttaaacgcaacttatcctctcaaccaacaatcaagtcattttttcaacaaccaggg
ccaaagacagtaaatgtcagcatcagtaccttagttactccagtggaaacagtacaccat
accaatcaaacatgtgttccaaatgatgatagtctgccagaaaacatgcagtgtacaact
tcagctgcggaagatcaggataacacaaatataccatcctgttcaatttcgacagacaag
tctaatgctgcagcattagagtggcaaagaatacaacaaaagatgaagatgacactgcca
cgttgcaaaggacatcgtgaaccatgtattccaaggtctgtgaagaagggccctaatata
ggccgcttattctatgtctgtcctcgtgctcagggacctgcatcaaataaagaagcaaat
tgtggccactttcagtgggcacctgtaaaatctaaagagaagcgcttgtga
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