Setaria viridis (green foxtail): 117843764
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Entry
117843764 CDS
T07951
Name
(RefSeq) meiosis-specific protein PAIR2
KO
K12778
meiosis-specific protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117843764
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
117843764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC84
HORMA
Motif
Other DBs
NCBI-GeneID:
117843764
NCBI-ProteinID:
XP_034580355
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Position
2:35424243..35441345
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AA seq
1001 aa
AA seq
DB search
MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFHEKYFSDKSVPALEMKIKKLM
PMDAESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSTEEVA
MNMSRTGSKKGSTTFTSNSSEVTPDQMRSSACKMIRTLVSLMRTLDPMPEERTILMKLLY
YDDVTPEDYEPPFFKGCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDNN
INSGDDGMSVDNGTYQDDDFSDTEVRPSEADRYVVAPNDGKCKGQSTGTISEDDTQDAAH
EEELTAQVKEWICSREIGTINVSDVLSNFPDISLELVEDIMERLLKDGVLSRASKDGYTV
NQTVDPKTPHIKKEVIMQNVSPTEGTKQNNGDLIYMKALYHALPMDYVTIAKLQGKLDGE
ASQNTVRKLIDKMVQDGYVKNSANRRLGKAVIHSESSNRKLLEIKKILEGNEGEQMAIDT
NAEHVESEHKDLLKVPEIRDGSTMGCLHSIGSDLTRTREVPALQQNVSMQSGQEASAMDK
DPSRTPTSARELAAPVCSLESGVLGQKIKRSLTGGSEMQSTQDKRSKKASMVKEPILQQG
RRHRYGRKHRAKLEAALTTFRSKLSDLRRALLHGSPSPQPPLPRLWCPFCSTELVDLDNR
SACSNAIYHLASGEHLKAVKDFLRKHGGGMDQVDSLRISEDEVAKWEKSCESLSKGAKTG
TEGLIGPSLGPMKDIRNESTCDNLDSFAQTNIPSFSNTASYVVMPLQSPTNGAYHPISAA
CHGAFSSGSVSYSAPYGTVGLPITAWGSSETHEQQGVLSTNCFHSTGPEMKGHQSTILGN
GPSPSISYAAHVQQSHSGGNLSSGPKANVHTGAPPPWLKANEHDPKNLLLRSCGPPLKGK
LRKLNPKRVGAAWAERRRAEMEMEKRGEIVPETSDSSWLPNFGGVWQSGTRKESRKDFEK
KLKHHDTKSNHELSLEIKPYISKRMRAGVDKSEQLGSHVEQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggctcagaagacgaaggaggcggagatcacggagcaggattcgctgcttcta
acaaggaatttgcttcggattgccatatacaacatcagctacatcagaggcctattccat
gaaaagtacttcagcgataagtcggttcctgcactagagatgaagattaagaagctgatg
ccgatggatgctgagtcaaggaggctgatcgattggatggagaaaggtgtctatgatgct
ttgcaaaagaaatatctcaagacccttctcttttgtatctgtgagaaggaggaaggccca
atgattgaggagtatgccttctcctttagctaccccaacaccagtactgaggaagttgcg
atgaacatgagtcgtacagggagcaaaaagggtagcactacatttacttcaaattcttca
gaagtaactcctgatcagatgaggagctctgcttgtaagatgatcagaacgctggtttca
cttatgagaaccttggacccaatgccagaggagcgaactattctaatgaagctgctgtac
tatgatgatgtcacacctgaggattatgagcctcctttcttcaagggttgtgctgacaat
gaagctattaatatatggaataagaaccccttgaagatggaagtggggaatgtcaatagc
aagcaccttgtgttagctttgaaggttaagagtgtccttgatccatgtgatgacaacaat
attaacagtggagatgatggcatgagtgtggataatgggacatatcaagatgatgacttt
tctgacactgaggttcgtccatctgaggcagatcgttatgttgtagctcctaatgatgga
aaatgcaaaggtcagagtactggtactatttcagaagatgacactcaagatgctgctcat
gaggaagagctaacagcccaagtaaaagagtggatatgctcaagagaaattggaaccatt
aatgtttcagatgtcctttctaacttccctgacatatccctggaactggttgaagatatt
atggagaggctacttaaagatggtgtactatccagggcaagcaaagatggttatactgtc
aaccagactgttgatcccaaaacaccacatataaagaaggaggtcatcatgcaaaatgta
tcacctactgaaggaaccaaacagaacaatggtgatttgatatatatgaaggcattatat
catgcacttcctatggattatgtgacaatagccaaacttcaaggaaagctggatggggaa
gccagccagaatacggtcagaaagttaattgacaaaatggtgcaagatggatacgtgaag
aattcagccaaccgaagattgggcaaagcagtcattcattctgaatccagtaacagaaag
ctccttgagataaaaaagatactggaaggcaatgaaggcgaacagatggccattgacacc
aatgcagagcatgttgagtctgagcacaaagaccttctgaaagtccctgaaataagagat
ggctccacaatgggttgcctccactcaatcggatctgatcttacccgtacacgggaggta
ccagcgctgcagcagaatgtgtccatgcagagtgggcaagaagcttcggcaatggataag
gatccaagcaggacccccacaagtgcgcgtgagctggctgcgcctgtctgttccctggag
agtggagtgcttggacagaaaatcaaaaggtccctaactggtggtagtgagatgcagtct
acccaggacaagcgatccaagaaggctagcatggtgaaggagccgatactccagcagggc
cggcgccaccgctacggccgcaagcaccgggccaagctcgaggccgcgctcaccaccttc
cgctccaagctatccgacctccgccgcgccctcctccacggctccccttctccccagccg
ccgctaccccgcctctggtgccccttctgctccaccgaactcgtcgacctcgacaaccgc
tccgcttgtagcaatgccatttaccatctggcaagtggtgagcacctgaaggctgtgaag
gatttcctgcggaagcacgggggagggatggatcaggtggattcgcttaggatttcagag
gatgaggttgctaagtgggagaaaagctgtgaatccttgagcaaaggagcaaagacgggg
actgaagggctgattggaccttctctggggccgatgaaagatatccgaaatgaatctacc
tgtgacaatttggatagttttgcacaaaccaatatcccatcttttagtaatactgcatct
tatgttgttatgcctttacaaagtcctaccaatggggcataccaccctattagtgcagcg
tgtcatggagctttcagctctggaagtgtttcttattccgctccatatggaactgttggg
ctgcccatcacagcttggggatcgtccgaaacacacgagcagcagggtgtgctgtctaca
aactgtttccacagtacgggtcctgaaatgaaaggtcatcaatctactatccttggaaat
ggaccaagcccatcgatttcttatgctgcacatgttcaacaaagtcactcaggaggaaat
ctgagcagtggcccaaaagcaaatgtgcatacgggtgctcctcctccctggttaaaagca
aacgagcatgatccaaagaatttgttactcagaagctgtggtcctcctttaaaaggaaaa
ttgaggaaactcaacccaaagcgggttggtgctgcatgggcagaaagaagaagagctgaa
atggaaatggagaagcgaggtgaaattgttccagaaacatctgattctagttggctacct
aattttggtggtgtctggcaatctgggacaagaaaggaatcgaggaaagattttgagaaa
aaactcaaacatcatgatacgaagagcaaccatgagttatctttggagataaaaccttac
atcagcaaaaggatgcgtgcaggtgttgataaatctgaacagcttggcagtcatgtggaa
cagtaa
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