Setaria viridis (green foxtail): 117843767 Help Entry 117843767         CDS       T07951                                  Name (RefSeq) THO complex subunit 3 isoform X1   KO K12880   THO complex subunit 3 Organism svs  Setaria viridis (green foxtail) Pathway svs03013   Nucleocytoplasmic transport svs03040   Spliceosome Brite KEGG Orthology (KO) [BR:svs00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     117843767   09122 Translation    03013 Nucleocytoplasmic transport     117843767  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:svs03019]     117843767    03041 Spliceosome [BR:svs03041]     117843767 Messenger RNA biogenesis [BR:svs03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      117843767 Spliceosome [BR:svs03041]  Complex C   Other components    EJC/TREX     117843767  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     117843767 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 DSE1_N Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_IFT140_1st NBCH_WD40 B-prop_COPA_B_2nd WD_LRWD1 TRM82_WD WDR90_beta-prop_4th Motif Other DBs NCBI-GeneID:  117843767 NCBI-ProteinID:  XP_034580357 LinkDB All DBs Position 2:23949363..23956000 Genome browser AA seq 331 aa AA seqDB search MEGKEEERKGSGGAAAGVSTPGANLKDLVSREYYGHKKKVHSVAWNCLGTKLASGSIDHT ARVWSIDPHGHSKVKDIELKGHTDSVDQLCWDPNHPDTVATAAADKSIRLWDARSGKCQV IELSGENINITYKHDGTQIAVGNKEDELTILDVRSLKVVKKHKANYEVNEIAWNKAGDLF FITTGLGHIEVVKDLEFLKPCKLNAHTAGCYCIAMDPLDRYFAVGSADSLVSLWNVKELL CIRTFTKLEWPVRTVSFNHTGEFIAYASEDPFIDIANVETGRSVHQIPCKAAMNSVEWNP KYNLLAYAGDDKNKYQADEGVFRIFGFETHN NT seq 996 nt NT seq  +upstreamnt  +downstreamnt atggagggcaaagaagaggagcggaagggcagcggtggcgccgccgccggcgtctcgacc cccggggcgaacctgaaggacctcgtttcgagggaatactacggccacaagaagaaggtg cactctgtagcatggaactgcctaggcacaaagcttgcttcaggatcgattgatcatact gcacgtgtttggagcattgatcctcatggccattcgaaggttaaagatattgaactgaaa ggccacacagatagtgtagatcagctatgctgggatccaaatcatcctgatacagttgct actgcagctgctgacaagtctattcgtctttgggatgctcgaagtggaaaatgtcaagtt attgaactgagtggagaaaacatcaacatcacatataaacatgatggtactcagatagct gttggaaacaaggaggatgaactgacgattttggatgttcggtcattaaaagttgttaaa aaacacaaggctaattacgaggtgaatgagattgcatggaataaagctggagatctattc ttcatcactactgggctaggacacattgaggtggttaaggatcttgagtttttgaagccc tgcaaattgaatgctcatacagcagggtgttattgcattgcaatggatccccttgatagg tacttcgctgttggaagtgcagattcacttgtcagtctttggaatgtcaaagagttgcta tgcattagaaccttcacaaaacttgagtggccagtaagaacagttagcttcaatcatact ggagaattcattgcatatgccagtgaagatcctttcattgatattgcgaatgttgagact ggacgatctgttcatcagattccttgcaaagcagctatgaacagtgttgaatggaatcct aagtacaacctcctggcctatgcaggagatgacaaaaacaaataccaagctgatgaaggt gttttccggatatttggctttgaaacacataactga

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