Setaria viridis (green foxtail): 117843769
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Entry
117843769 CDS
T07951
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117843769
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117843769
Peptidases and inhibitors [BR:
svs01002
]
Serine peptidases
Family S54: Rhomboid family
117843769
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
QcrA_N
DER1
DUF4124
Motif
Other DBs
NCBI-GeneID:
117843769
NCBI-ProteinID:
XP_034580362
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Position
2:31784981..31787797
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AA seq
394 aa
AA seq
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MDLLPSQSGENESVGPSGQRRVRPKQSEAEPAEEPSSSVGVGPRTQAVVPMASWLLLPLP
SFPWLPPPPPPGSSSGGRGGGGGGGDGGDWRPNVVAAFAGAQVGSALRRRFAGLLRSPEV
RHLEALPNMGDICFGGSHSFATHPILGALGNVFPASYVCSFTLFNGNGSGGTYIGKGKVL
SRRPRRIDSKKRLWTNVLLAINVLAYIAQVASQGKLLMWGAKINSLIDRGQFWRLATSSL
LHANVTHLAFNCFSLNSIGPMVEMLSGPRRFIAVYISSALAGSLMSYRCCESPAVGASGA
IFGLVGAHAVYMWRHRSYFGNARESLEHIGRVVVLNMGMGLLSRGIDNWGHLGGLLGGVA
VAWFLGPAWQYQYVGKDGRVVFKDRAPVLRLIKG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacctccttccgagccaatccggtgaaaacgaaagtgtgggtcccagcggacagcgc
cgcgtgcggcccaagcaaagcgaggcggaacccgccgaagagccctcgtcgtcggtgggg
gtgggtccacgcacgcaggcggtggtgcccatggcgtcgtggctgctgctccccctcccc
tccttcccctggcttccccctccgccaccgcccggatcctcctccggcggccgcggcgga
gggggcgggggcggagacggcggcgactggaggcccaacgtcgtcgcggccttcgccggc
gcgcaggtcggcagcgccctccgccgccgcttcgcgggcctcctccgctcgccggaggtg
cgacatcttgaagccttgccgaacatgggtgacatttgttttgggggatcacactcattt
gcaacacacccaattcttggcgcgttggggaatgtgttccctgcgtcatatgtttgcagc
ttcactctattcaatgggaatgggtcaggtgggacatacatcggcaaaggaaaggtgctg
tctagacgacctcgcagaattgattcgaagaagaggctgtggactaatgttcttcttgct
attaatgtcctggcttatatcgctcaggtagcatcacaaggaaagcttcttatgtgggga
gccaagatcaacagtctgattgatagaggacaattttggcgtttggcaacatcatctctc
cttcacgcaaatgtcactcaccttgctttcaattgtttctctttaaactcaattgggccc
atggtggaaatgctaagtggtcctagaagatttattgctgtttatatcagttcagcgctg
gcaggttcactgatgagttatcgctgttgtgagtcacctgctgttggtgcgtcaggtgcc
atttttggattggttggcgcccatgcagtttatatgtggaggcatagaagttattttggc
aatgcaagggaaagtttagagcatatcgggcgtgtggttgtcttgaatatgggtatgggc
ctcctttcaaggggaattgataactggggtcatctgggaggcttgctagggggagttgct
gtggcatggttcctaggtccggcatggcaatatcagtatgtgggaaaggatggcagagtg
gttttcaaagacagggctccagtcctccggctaataaaggggtag
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