Setaria viridis (green foxtail): 117843845
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Entry
117843845 CDS
T07951
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117843845
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117843845
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
Helicases
117843845
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
117843845
NCBI-ProteinID:
XP_034580465
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Position
2:45723313..45727145
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AA seq
540 aa
AA seq
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METSKLSSALFAGTHFNRKRFAADFARFHQGPTPSPAAPSALSPEKKRKRKSGKAKAKNN
KKKRAEAAAASSSDVVEGFNVFKGLVGKNDELRSEKVVIGKDEDSVSVRRRKEIEREIER
AAVLRKRFDIHIAGQNVPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAIPIL
LSGRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKMAK
GRKYYIKLMTKDLSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLF
ELGFVEVIDSVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAIRVIVGRKNSASSLIK
QKLIFAGTERGKLLALRQSFQESLNPPVLIFVQSKDRAKELYKELAFDDVRADVIHADLS
EEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESAAAYIHRIGRCGRAG
RSGEAITFFTEEDKPFLRNIANVLVSSGCEVPSWIMALPKLKRMKHRVDRDPISTLPDED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgaagctctcgtcggcgctcttcgccggcacccacttcaaccgcaagcgc
ttcgccgccgactttgcgcggttccatcaaggcccgactccctcacccgccgccccctcc
gcgctgtccccggagaagaagcggaagcgaaagagcggcaaggcgaaggcgaagaataat
aagaagaagcgagcggaagcggctgccgcctcgtcgtcggatgttgtggaggggttcaat
gtgttcaagggattggtgggtaaaaatgacgagctgcgttctgagaaggtggtgataggg
aaagatgaggattcggtgtctgtgaggcggcggaaggagattgagagggaaatcgagagg
gctgcagttcttcggaagaggtttgatattcacattgctggacaaaatgttccagcacca
cttgagagctttgaagaactgatttcaagatatgggtgtgattcctatctggttgggaac
ttgtcaaaacttgggtttcaagaacctacaccaatacaaaggcaggccattcccattctt
ctttcggggagggaatgctttgcttgtgcacctactggttctggcaagacactggctttc
ttgtttccacttcttatgaaaattaagccagggtctaaaggtggtgttaaagctgtgatt
ctttgcccaacgagagaattggccgcacaaactgtgagagaatgcaagaagatggctaaa
ggaaggaagtactatattaaattgatgaccaaagatctctccaaatcagggaatttcaaa
gatatgcactgtgatatccttgtttccaccccgcttcgtttggaccatgctgtaaagaaa
agagaccttgatttaagtagtgtggaataccttgtcttggatgaatctgataaacttttt
gagcttggatttgttgaagtgattgattcagttgttgaagcctgttccaatccttcaata
attcggtctttgttcagtgccacattgcccgattcaattgaggctcttgcacgcactata
atgcacgatgccattcgagtcattgttggaagaaagaattcagcttcctcactgattaag
caaaaattgattttcgctggaactgagagggggaagttgctagctcttcggcaaagcttt
caagagtctctcaatccaccagtattgatctttgtccaaagcaaagacagagcaaaagag
ctttacaaagaactggcatttgatgacgttagggctgatgtaattcatgcagacctcagt
gaggagcagcgtcaggatgctgttgacaacttgagagctggaaagacctgggtactgata
gcaacagaagtcattgctcggggaatggatttcaaaggtgtaaactgtgtgataaactac
gattttccggagtcagctgctgcctatattcacaggataggacgatgcggaagagccggt
agatctggggaggccatcacgttcttcacagaggaggacaagccattcttgaggaatatc
gcgaacgtgctggtatcttcaggatgtgaagttccttcctggataatggcattgccgaag
ctcaagcgaatgaagcacagggtggatagggacccaatctccaccttaccggatgaagat
taa
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