Setaria viridis (green foxtail): 117843940
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Entry
117843940 CDS
T07951
Name
(RefSeq) probable histone acetyltransferase HAC-like 3 isoform X1
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
svs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117843940
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117843940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117843940
03036 Chromosome and associated proteins [BR:
svs03036
]
117843940
03029 Mitochondrial biogenesis [BR:
svs03029
]
117843940
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
117843940
Transcription factors [BR:
svs03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
117843940
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
117843940
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
117843940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
PHD
Motif
Other DBs
NCBI-GeneID:
117843940
NCBI-ProteinID:
XP_034580613
LinkDB
All DBs
Position
2:complement(3764913..3773761)
Genome browser
AA seq
1274 aa
AA seq
DB search
MMAQTLQGKVMASYAPSSFSIQQQMSPSDFEMLQPDNMDQSTSPIRGIIIQKIASCLKKR
EQFAKTSPDYLLKFSRKIDECLYKRAPKVHYMDLSTLEVRVNALLNSVSHRNHRDSWISS
AAPSTKNLQQLPGIQMIDSSVYHERVDPAFTNLPACARDMPTHTMFTSQRYLPYNHNVAA
ANFHLTERPESFRSTLVAPCVSALPKCSSGLGEIASAGFPNGHVKDNFPGHHILNDMSEF
SPGGAHPVDSPISSMSGSSSPLSAVCDPTTSSNAMIRSSVDSISKASGQKLSAGSDSTSE
GQSFQQYREYEKKLDGAWSQPVEQSVHSNSTTERHEMYQGQCQLDRCVEMKEKFWRMSDC
EDFCRETYSSLSSPSAQYQCCLMADCDPCDPEGERIERSEQTSNSTVSKPSSPVSDESYG
KRPVKRLKADVAGLVDVNQVESPKEQKPVVNGGNHACGETLHSEITELPTKSHCSSLGVI
NADTDDMLRQGSEGVHNMEIVTEKELHCVKDDIEMKDSKSVDQTASGVKLSLRRKGGASI
LYALTAEEIRDHLSSLINQHTCLGKLTSQETQNNEGLPDQNTCSLCGMEKLLFEPPPRFC
ALCFKIINSTGCYYAEVENGKDKSSICSKCHHLSSSRAKYVKRFDYAETDAETEWWVQCD
KCKAWQHQICALFNKKCEGAKAEYTCANCFLKEKDSGDIYALESSTVLGAQELPRTKLSD
HIEQRLSERLEQDRQQRASTSGKGAEEVPRVEGLTVRVVSSADRVLQVQPRFHEFFKQEK
YPGEFPYKSKAILLFQKIEGVDVCLFAMYVQEYGSDCPSPNQRHVYLAYIDSVKYFRPEI
KSASGEALRTFVYHEILIGYLDYCKKRGFVSCSIWACPSTKRDDYVLYCHPTVQKMPKSD
KLRSWYQNLIKKAVKEGVVVERNTLYDFFLQPANECKANISAACLPYCENDFWPGEAERL
LEKKDDKTSQKQETQVGRLLRVAKRDDRKGNLEDILLVHKLGERMRTMKEDFMMLCLQQF
CKHCHQPIVSGRSWVCTSCKNFHLCDKCHAEEQNTAQKDRHPATTKQKHAFERIEVESLP
ETDDGDPIMESKYFDSRIDFLKHCQDNQFQFDTLRRAKHSTMMILYYLHNSSCSACHHAV
DRCLVWRCLRCIGCTFCDPCYKQNGESLHIHELRQIDTSKKNAQDYVECLVHASRCFDPR
NCTLQVCLTLKKLFFHGVRCDIRARNWGGCQKCVFMWKILLHHSKGCNDTDCTVPRCRDI
KVYMAEKMKLPGPV
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcaaaccctgcaagggaaagttatggcctcctatgcgccgagcagcttctct
attcagcaacagatgtcaccgagtgattttgaaatgcttcagccggataacatggatcag
tctacctctccgatccgcggcattatcattcaaaaaattgcaagttgcctgaaaaagagg
gaacaatttgctaaaaccagcccggattaccttctgaaattttcaagaaaaattgacgaa
tgcctctacaaaagagcaccaaaggtccattacatggatctcagcactctagaagtcagg
gtgaatgctttgctcaattctgtatcgcatagaaaccacagagattcatggatatcctca
gcagctccatcgacaaaaaatttacagcagctgcctgggatacagatgatagactctagt
gtctatcatgagagagttgatcctgcttttactaatttgcctgcatgtgcaagagacatg
cctacacatactatgttcacttctcagagatatttaccatataatcacaatgttgcagct
gctaattttcatctaactgaaaggcctgaaagctttaggagcaccttagttgctccatgt
gtgtcagcacttccaaaatgtagttcaggacttggtgagattgccagtgctggattccca
aatggccatgtaaaggacaattttccaggtcatcacatcctaaatgatatgagcgaattt
tcaccaggtggtgctcatcctgttgatagtccaatatcatctatgtctgggagttccagt
cctttatcagccgtgtgtgatccaaccacaagttccaatgcaatgataagatcatcggtg
gactctatctctaaagcaagtggacaaaaactttctgcaggttctgattccaccagtgaa
ggacaatcatttcaacaatacagagaatatgagaaaaagttagatggtgcatggagccag
ccagtagagcagtcagttcactcaaatagcacaactgaaagacatgaaatgtatcaagga
caatgtcaacttgacagatgcgtggaaatgaaagaaaaattttggcgcatgtcggactgt
gaagatttctgcagggagacatactcaagtttaagctcccccagtgcccagtaccagtgc
tgccttatggcagactgtgatccttgtgaccctgagggagagagaattgagagatctgag
cagacatcaaatagcacagtatcaaagccatcctcacctgtttcagatgaatcttatggt
aagcgtccagtaaagcgcctgaaggctgacgttgccggtcttgtcgatgtcaatcaagta
gagagtccaaaggagcaaaagcctgttgtgaatggggggaatcatgcgtgtggtgaaaca
ttacactcagaaatcacagaattgcctacaaaatcacattgcagttccttgggtgtcatt
aatgctgacaccgatgatatgctacgacagggtagtgaaggtgtacataacatggagatt
gttacagaaaaagaattgcactgtgtaaaggatgacattgagatgaaagactctaagagt
gtggatcagacagcaagtggggtcaaattaagtttgaggaggaaaggaggagcttctata
ctttacgcattaactgccgaggagattcgagatcacctgagtagtctaataaaccagcat
acttgtttgggcaagttgacatctcaagaaacccaaaataatgaaggcttgcctgatcag
aatacatgcagtttatgtgggatggagaagcttctttttgaaccacctccacgattttgc
gctctctgtttcaaaataataaattctacaggttgctattatgctgaagttgaaaatgga
aaggataaatcttcaatttgtagcaaatgccaccatctaagcagttccagagctaaatat
gttaagagatttgattatgctgaaacagatgctgaaactgaatggtgggtccagtgcgac
aagtgcaaagcttggcaacatcaaatctgtgctctgttcaacaaaaaatgtgaaggggca
aaggctgaatatacttgtgcaaattgttttttgaaggaaaaggatagtggagacatttat
gcactggagtcatccactgttcttggagcacaggagttgccaagaactaaattaagtgat
catatcgagcaaaggctttctgagaggctggagcaggacaggcaacagagggcaagcacc
tcaggaaagggcgctgaagaggtaccacgagttgaaggtcttacagttagagtagtatct
tcagctgacagagtactgcaagtccaaccacgttttcatgaattttttaaacaagaaaag
tatcctggggaatttccatacaaatcgaaggcaattctcttgtttcaaaagattgaaggt
gtggatgtttgcctgtttgccatgtatgtacaagagtacggttcagattgtccatcacca
aatcagaggcatgtttatcttgcatatatcgattctgtcaagtacttcaggcctgaaata
aaatctgcaagtggggaggctctccgtacctttgtgtatcatgaaattttgattggttat
ctggattactgcaagaaacgaggatttgtaagttgttccatatgggcttgcccatctacg
aagcgtgatgattatgttttatattgtcatccaacagtacaaaagatgcccaagtcggac
aaacttcgaagctggtatcagaacttgatcaagaaggctgttaaggagggtgtagttgtg
gagcgtaatacactctatgactttttccttcagcctgccaatgaatgcaaggccaatata
tcagcagcatgcttgccatactgcgagaacgatttctggcctggagaagcggagaggctc
cttgagaagaaagatgataaaacctcacagaagcaagagacacaagtaggaaggctctta
cgtgttgccaaacgtgatgacagaaaaggaaaccttgaggatattttacttgtgcacaag
cttggagaaaggatgcgcaccatgaaagaagacttcatgatgctttgtctgcagcagttt
tgcaagcactgtcaccaacctattgtatctggcagaagttgggtttgcactagctgtaaa
aattttcatctttgtgacaagtgtcatgcagaggagcagaatacagcacagaaggacagg
catccagccacaacaaaacagaagcatgcatttgaaagaatagaggtagaatctcttcca
gagactgacgatggagatccaataatggaaagcaagtattttgacagcagaatagatttc
ttgaagcactgtcaagacaatcaattccagtttgataccctccggcgggcaaagcattct
acaatgatgattctttattatctacataattcaagttgttctgcttgccaccatgctgtg
gatcggtgcttggtgtggcggtgcctacggtgcataggctgcaccttttgtgatccatgc
tacaaacaaaatggtgaaagtttgcatattcatgaattaagacagattgacactagcaag
aagaatgcacaggactatgttgaatgccttgtgcatgcatcgagatgcttcgatcctcgc
aactgcactcttcaagtttgtttaacgttgaagaaactgttcttccatggcgtacggtgt
gatatccgtgcccgcaattggggaggttgccagaagtgtgtcttcatgtggaaaattctg
ctccaccactcaaaaggttgcaatgatacagactgtacggttccgagatgcagggatata
aaggtatacatggctgaaaagatgaagcttcctggtcctgtgtag
DBGET
integrated database retrieval system
