Setaria viridis (green foxtail): 117843948
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Entry
117843948 CDS
T07951
Name
(RefSeq) RINT1-like protein MAG2L
KO
K20474
RAD50-interacting protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117843948
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
117843948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
TetR_C_40
Motif
Other DBs
NCBI-GeneID:
117843948
NCBI-ProteinID:
XP_034580626
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All DBs
Position
2:complement(47343602..47347438)
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AA seq
806 aa
AA seq
DB search
MSTPRPRPPPASLRGFLDAHFASPDDLAAAPALAELLRRECAELDASLRRLEAQLGAAAA
SWLARSAGARSGLHRIRSTGGAVGAEDEGAETVRKVGLPALVREIQRIDTIRLYAEATLQ
LEALVGNLEDVAFSIVRQASKLNLSSILRKSNETELKQAKLLNAVNAVRDIERELVRIRT
SRPQWTSLIMAVDSRVDKTLAILRPQALTDYRALLAALGWPPPLSSPDTQNDKYSQIPNP
LVLMNGENKEKYSQSFLALCALQHVQANREVRQCQLAAATPAWADSKCFDKTACLENGLW
AIDELVHPVASRMEHHFAKWSEQPEFIFTLVYKITKDFMDGVDDILQPLIDHARLAGLSA
KESWVTGMVKMLVGYLERQIFPALVTSNQDQSTVGKPEVESSWMHLNDLMISFDKRMQLL
ADSGIQKAASLSEGLSRSLSVFSIYGEHPDWLHIWATVELSSAQDKLKSEMEDETNWSCS
DSQNDQLGHVENSMKFLLSTREDYKAPPLSEFVVKTALSMIERGRALPNRGMQIQYNRSS
SVKFLNEFFLVLRDRCEALQLSNTALEDQSISKASCAINAARYCESVLREWDEDTAFLDM
DPQGSLFAGETSFLVKLGTNYLEQILSAILLEFEDMSWEYVQNIGSWSGQTALDDQILDE
ENTGVSPGFLGSLDVLTDRTTKLKLYLNSKDFLDLWRSIAEGLDYFIYSSIRWGEVSFSD
TGVIQLRVDTKALLHIFRPFCSRPEAFLPFLSESLRLLTMKKSDAQYLLEMLMNDTSSDN
CLKHQGLHHVNARQAAKILRSRKFGG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccgcggccgcgccccccgccggcgagcctccgcggcttcctggacgcgcac
ttcgcctcccccgacgacctcgccgccgcgccggcgctcgcagagttgctgcgccgcgag
tgcgccgagctcgacgcctcgctccgccgcctcgaggcgcagcttggtgccgcggccgcg
tcctggctcgcgcgctccgcgggggcccgctccggcctccaccgcatccggtcaacaggc
ggagccgtcggcgcggaggatgagggggcggagacggtgcggaaggtcggcctgcccgcg
ctcgtgcgggagatccaacggatcgacaccattcgcctctacgcggaagctactctacag
ttggaagctttggttggcaacctggaagatgtggcattttccatcgttagacaggcctca
aagttgaacctatcatccatacttcgaaaatcaaatgaaacagaattgaagcaagcaaag
ttgctcaacgctgtcaatgctgtgagggatattgagcgagaattggtaaggatcagaaca
agtaggccacagtggaccagccttatcatggcagttgattctagagtggacaaaactcta
gccattttgaggcctcaagcactcacggattatcgggccctacttgcagcattgggttgg
ccacctcctttgtcctcaccagacacacagaatgataagtactcccaaatcccaaatcct
ctagtcctgatgaatggtgaaaataaagagaaatattctcaaagcttcctagcactctgt
gcactgcagcatgtacaagcaaaccgtgaagtccgtcaatgccaattagcagcagcaact
cctgcctgggcagattcaaagtgctttgataaaactgcttgcttggaaaatggactctgg
gcaattgatgaattagttcaccctgttgcttcaaggatggaacatcattttgcgaaatgg
tctgagcagccagagttcatttttacccttgtttacaagataacaaaggatttcatggat
ggggtggatgatatattgcaacctttgatcgatcatgcaaggttagcaggcttaagtgcc
aaagaatcttgggtaactggaatggtgaaaatgcttgtaggataccttgagaggcaaatt
ttcccagcactcgtcacctctaatcaggatcagtctactgttggcaaacctgaagtagag
tcctcttggatgcacttaaatgacctaatgatttcttttgataaaagaatgcagcttctg
gcagattcaggaattcagaaagccgcatctctttctgaaggtctgtctaggtcattatca
gtcttttcaatatatggtgaacaccctgattggcttcacatatgggctactgttgagctt
agttcagcacaggataagctgaaatctgaaatggaggatgagacaaattggtcatgtagt
gatagtcagaatgaccagcttggtcatgtggaaaattcaatgaagtttcttctctctaca
agagaagactacaaagctccaccactctctgaatttgttgtcaaaactgctttgtcaatg
attgaaagaggccgtgctctgccaaataggggaatgcagatccagtataacagatcctct
tcagtcaagttcctgaatgaattttttcttgtcttgcgtgatcgatgtgaggcattgcaa
ttgtcaaatacggcattagaagatcagtctatatcaaaagcttcatgtgcaattaatgct
gcacgttactgtgaaagtgtgcttcgggaatgggatgaagatactgccttcttggatatg
gatcctcaagggtccctgtttgcaggtgaaaccagctttttggttaaattagggaccaat
tatctcgaacagatactgtctgccattctgcttgagtttgaagatatgtcatgggaatat
gtccagaacattggatcgtggagtgggcaaaccgccctagatgatcagatcctggatgaa
gaaaacacaggagtatcccctggttttctaggtagtctagatgttctgacagacaggacc
actaagctgaagctatatcttaattccaaggatttccttgatctttggaggagtatagca
gaaggcctcgattacttcatctacagcagcatacggtggggtgaagtaagtttctccgac
acaggagtaattcagttaagagttgacacaaaagctcttctccacatctttaggcccttc
tgttcgagacctgaagcttttctccctttcctaagtgaatccctgaggctgttaaccatg
aagaagtcagatgcacaatacctgctggaaatgttaatgaatgacacgagcagcgacaat
tgcctaaagcatcaaggattgcaccatgtaaatgctagacaggctgcaaagatcttaaga
agccggaagtttggtggttga
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