Setaria viridis (green foxtail): 117844101
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Entry
117844101 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC6
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117844101
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117844101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117844101
NCBI-ProteinID:
XP_034580766
LinkDB
All DBs
Position
2:complement(11380722..11383988)
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AA seq
734 aa
AA seq
DB search
MDNEGNQQRSNNEDVLHSLLGPEDQMNIDSANVDDDNDDVYIPEAPSKRPKRHAAEQIQE
LKAAYKQCDHPDEKARRALGAKIGLEASQVRFWFQNQRAQMQAKAQVQDTKAVQQEHAAL
MAENASLRHAMLTMSCVACSGGTAPAEPSPEKRRLLAENARLRDEHMRATALLHKILLEA
EAPPPSGRPVPAASTHSMLSAAVEGRGALLRHAEASMDQFLMLATKGEPLWVLTPDGEVL
NCQVYQKRTFPVLLGTCPDGFVREATREAGVVRGAAAHLVGILTDANRWSETFPGVVAGA
TAGNVVNVGVFAPHNGLIQLMNANLWVQSPRLRNRSVNFLRYSKLTAEGHWAVMDVSVDA
ILGLEGSRKVDLNVDSDVMQAWHKGCRLLPSGCLVEDMGNGYCKVTWVVHAEYDETTVPT
MFKPLFRSGKAHGAQRWLASLQRQCEYLSALHSSHVPRSSHNTGESISPMGRRGIMELAQ
RMMASFYSAVSGPVTQPSSSIDEWHGSNGTGAERIAAAVRMVTWKKAGSMDGEPAGLVLS
SSTTVWLPNTPPQLVFEYLCNGQCRGEWDTFANGAAVEELGSVATGHLDGNAVSVLCPNV
TDGINSKMLILQEARTDASCSIVVYAPVEEERMRAVMNGGDHASVDFLLPSGFAVLPDGH
GKARRHAPCTSEAPVGDGNTAGALLTVACQALLPGSPSGEHTARAFDDVGGLLCRAIKKI
KAAVKAKIVVASLM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgagggaaaccagcaacggagcaacaatgaggatgtgttgcacagcctgcta
ggacccgaggaccaaatgaacattgattcagctaatgtagacgacgacaatgacgacgtc
tacattccagaggcgccgtccaagcgtccgaagcgccacgctgcggagcagatccaagaa
ctcaaagctgcatacaagcagtgtgaccaccctgatgagaaggcgcggcgcgctctcggc
gctaagattggcttggaggctagccaggttcggttctggttccaaaaccaacgcgctcag
atgcaggcgaaggcccaggtgcaggataccaaggcggttcagcaagagcacgccgcgctg
atggccgagaatgcgtcactccgccatgccatgctgacgatgtcatgcgtcgcgtgcagc
ggagggacggcgcccgccgagccgtcgccggagaagcggcgcctgctcgcagagaacgcg
aggctcagggacgagcacatgcgcgccaccgccttgctccacaagatcctactcgaggcg
gaggcgcccccgccgtccggacgcccggttccggccgcttccacccactccatgctctcc
gccgccgtcgagggcaggggcgctcttctccggcatgcggaggcttccatggaccagttc
ctgatgctcgcgaccaaaggggagccactgtgggtgctgacccccgacggcgaggtgctt
aactgtcaggtgtaccagaagagaacgttcccggtgcttctcgggacctgcccggatggg
ttcgtcagggaggctactagagaggccggcgtggttagaggcgccgccgcccacctcgtc
ggcatccttacagatgcgaaccggtggtccgagactttccccggtgtagtggcaggtgcg
accgccggcaatgtcgtcaacgttggtgttttcgctccgcacaacgggctaattcagctg
atgaatgcaaacctgtgggtgcagtcgccacgcctgcgcaaccgcagcgtgaactttttg
aggtatagcaagctgacggcggaggggcattgggctgtgatggacgtgtccgttgacgcc
atccttggactcgaaggtagccgcaaggttgatctcaatgttgacagcgatgtcatgcag
gcatggcacaagggctgcaggctgctgccatctggttgccttgttgaggacatgggcaat
ggctactgcaaggtcacatgggttgtgcacgcggagtacgacgagaccaccgtgccgacc
atgttcaagccactgttccgctctgggaaagctcacggcgcacaacgttggctcgcgtcg
ctccagaggcagtgcgagtacctctccgctctacactccagccatgttccaagaagcagc
cacaacacaggtgagtccatttcgccgatgggaaggaggggaatcatggagctggcccaa
cggatgatggccagcttctactcggccgtctccgggccggtcactcagccgtcaagcagc
atcgacgagtggcatggcagcaacggcaccggtgccgagaggatcgccgcagctgtgcgc
atggtgacctggaagaaagctggcagcatggacggagagccggccggcctggtgctcagc
tccagcaccacggtgtggctgccaaacacgccgccgcagctcgtgttcgagtacctctgc
aatggccagtgccgtggcgagtgggataccttcgccaatggcgccgcggtggaggagttg
ggctccgtcgccacgggccatctcgacggcaatgccgtctccgtcctctgccccaacgtg
actgatgggatcaacagcaagatgctgatcctgcaagaggcgcgcaccgacgcgtcgtgc
tccattgtcgtctacgctccagttgaagaggagaggatgcgtgcggtcatgaacggcggc
gaccacgcctccgtcgacttcctcctgccgtcggggttcgccgtcctccccgacggccac
ggaaaggctcgccgccacgctccgtgcacttccgaggctcctgtcggcgacggcaacact
gcgggggctcttctcaccgtggcatgccaggcactgctgcccggctccccgtccggcgag
cacaccgccagggcatttgacgatgtcggcgggctgctctgccgtgcaatcaagaagatc
aaggccgccgtcaaggccaaaatcgtcgtcgccagcttgatgtga
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