KEGG   Setaria viridis (green foxtail): 117844533
Entry
117844533         CDS       T07951                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:svs03036]
    117844533
   03400 DNA repair and recombination proteins [BR:svs03400]
    117844533
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117844533
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117844533
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 117844533
NCBI-ProteinID: XP_034581120
LinkDB
Position
2:4351220..4361769
AA seq 1144 aa
MARVLPGEWVPHVEAYVDVSRPAAQHSASVDALAALVNKDKLTLFDLVSKMEMYLTTTDH
IVRSRGILLLGEILSRISVKWLDVNTITTLSEFFISRLSDWQAIRGALVGCLALLHRKQG
VGCIVIADVKRIVESFLQNVQVQSLAAADRKLCFQILSCILDRYPEVVKTMDGEQLYWIC
EAIDEEKDPECLKLSFHVVEVVMKLFPDPSGLAAQFASEFFEILSKYFPVYFTHGVGDDL
NATRDDLSRALMHAFCSTPYFEPFAIPLLLDKLSSSLPLAKIESLKYLDNCIRFYGTDRM
VRHASAVWFKLKEVIFSSSPEEFLLTSGSPKDAEKNKNQMVLEALKCLKTAIMCIDSSDK
DLFINLILLDEDIVNKIHSISSEEKSILSSLEDLAQLHALGSVISILSESSTYLCARVLQ
EHFTQLVDILGTSTDYESRQLNTCNGSSSAADNYGALYLSVQMLTSCREVAFVSYADCSS
IKLAKESWWLILEKKLDRLIHFLGSFLTIDSESMQSMFRQEYVSCAVKGLLTLATFPEQC
SPLTANAYEDILAMLTSVIISKFENVDLWRLSLKALTSIGSSIGEFHASQKEVIYCRTVV
DKIVSLVESYDGPMPLSLRLEASYEIGTAGFNYMLRVARSLEGAVVTNISKTNGGMECTE
HVAHLFECYSGQVLPWLFTSGGINELALSFAMHLLDEIKDLTMLDRIASQGLLDSLMAGM
KLLVGVCTEEQQTRIVQKAYSMVSSVIPLPLKSMTYHLLSADELVPSHTVQETALVGMLS
SVIVGLRPQTPAPDMVVMINLFTVFLLNGKLPAAYALASVFNKYLHNPEFSHENQLDKIL
DGILERCFSTVLASNHSKISHSSVDTSNDANFLDVSSGNVLSKIDILSGLAWIGKGLLMR
GDEKVKDISMFLLKCLCSDETLATIRSHEEESYVNDSSNTSIATSAAGAFHVMMSDSEVC
LNKKFHARIKPLYKQRFFSIMMPIFLSKIKEATSMTTKLALYRAFGHIISNAPVPAVITE
AHQILLVMVDSLAKLSVDIQDKDLVYNLLLVLSGMLMDEKGKECILDNVHITISVLTQLV
SYPHMMVVRETALQCLVAFSTFPHSKVFPMRRKVLQAAIKALDDKKRAVRQEAVRCRQTW
QSFA
NT seq 3435 nt   +upstreamnt  +downstreamnt
atggcgagggtccttcccggagagtgggttccccacgtagaggcctacgtcgacgtctcc
cggcccgccgcgcaacactctgccagtgtggatgcgcttgcggccctggtgaacaaggac
aagctgaccctcttcgatttggtgtccaagatggagatgtatttgacgacaacagaccac
attgtgagatcaagaggaatactgctcctcggggagatattgtctcgaatttcggttaaa
tggttagacgtcaataccatcacaactttgtcagagttttttatatcaagattgtcagat
tggcaagcaatacggggagcacttgttggttgcctggcactattgcacagaaagcaaggt
gttggttgtatcgtaattgccgatgtcaaaagaatcgttgagtctttcttacagaatgtt
caagtgcaatcacttgcagctgctgaccgcaagctgtgcttccaaattctgagctgcata
ctggatcggtacccggaagtcgtcaaaacaatggatggtgaacagctgtactggatctgt
gaagcaattgatgaagagaaggacccagaatgcttgaagctttcttttcatgtagtggaa
gttgtcatgaagctatttccagatccatctggtttggcagcgcaatttgcaagcgagttt
tttgagattttaagcaagtattttcctgtctacttcacacatggagtgggcgatgattta
aatgctacaagggatgacctttccagagcattaatgcatgccttttgttccaccccctat
tttgagccatttgccatccctttgcttctcgataagctttcttcctctcttcccttagca
aagattgaatctttaaaatatctggacaattgcattcgcttctatggaactgatagaatg
gttagacatgcatcggctgtgtggtttaagttgaaagaagtgatttttagctcttctcca
gaggaatttttattaacatcaggatctccaaaggatgcagagaagaataagaatcaaatg
gtcttagaggctttgaaatgtttgaagactgctattatgtgtattgattcttcagataaa
gatcttttcatcaatttgatcttgttggacgaggatattgtgaataagatccattctata
tcaagtgaagaaaagtccatattgagttcattggaagatctggcccaactgcatgcactc
ggaagtgtcatttctattctttctgaatcatctacatatttgtgtgccagagtccttcaa
gagcattttacacagttggtagatattttgggaacatcaactgactatgaatctcggcag
ttgaatacttgcaatggatcatcttctgcagctgacaactatggggcgctctatttatct
gttcaaatgcttacatcctgtagagaagtggcttttgtatcatatgctgattgttcttct
attaaattagcgaaggagtcctggtggcttatcttagagaaaaagttggatcggctaatc
catttccttggatcatttttaactattgattcggaatctatgcagtcaatgttcagacaa
gaatatgtctcatgtgctgtgaagggcttgttaacactagcaacattcccggaacagtgc
tcacctttaacagcaaatgcttatgaggatattctggctatgcttacttcagtaattata
agcaaatttgaaaatgttgatttatggagattgtcattaaaagccttgactagcattggt
tcatctattggggagttccatgcttctcaaaaggaagtgatttactgccgaacagttgtt
gacaagattgtttctttggttgaatcttatgatggcccaatgcctctcagcctaagactt
gaagcaagttatgaaattggaactgctgggttcaactatatgttaagggttgctagatca
cttgaaggagctgttgtcaccaatatttctaagactaatggaggaatggaatgcactgaa
catgtagcccatttatttgagtgctactccggtcaggtccttccttggttgtttacttct
ggtggtatcaatgaacttgcattgagctttgcgatgcatcttttggatgagattaaggac
ttaactatgttagatagaattgcttcacagggcctccttgactcactaatggcaggaatg
aagcttttagttggagtctgtacagaggagcaacaaacacggattgttcagaaagcatat
agcatggtatcatcagtgatcccactgccgttgaaatcaatgacatatcatcttttgtct
gcagatgagttagttccttcacacactgttcaagaaacagctctggttggcatgctttca
tcggttatagttggccttcggcctcaaacacctgcacctgatatggtagtgatgatcaac
ctctttacagtctttctactgaatgggaaactgccagctgcttatgcattagcttctgtt
ttcaataagtatctacacaatccagagttctcacacgagaatcaactggataaaatactt
gatggtattcttgagaggtgtttctcaactgtattagccagcaaccactcaaagatatcc
cactcttctgttgacacctcaaatgatgctaatttcttagacgtgtcgtctggaaatgta
ctttctaagattgatatcttgtctggcttagcctggattggcaaaggattacttatgaga
ggagatgagaaggtgaaggacatttcgatgtttctgcttaagtgtctatgctcagatgag
actttggctactattcgatcccacgaggaagaatcttatgtcaatgattcatcaaatact
tctattgcaacatccgcagctggtgcattccatgtaatgatgagtgattcagaagtctgc
ctaaataaaaaatttcatgcaagaataaagccattgtataagcagcgtttcttctcaatc
atgatgccgatcttcctctctaaaatcaaggaagcaacgtcaatgacaacaaaattggca
ctgtaccgagcttttgggcatatcatttccaatgctccagtaccagcagttataactgaa
gcacatcagattttactcgtgatggttgatagcttagctaaattaagtgtggatatccag
gacaaggatttagtgtacaatttgttacttgtcctgtctggaatgttgatggatgaaaag
ggcaaagagtgcattctggacaatgtccacatcaccatcagtgttcttacccaacttgtt
tcctatcctcatatgatggttgttcgggagacagctttacaatgtttagtagccttttct
acttttcctcactcaaaagttttccctatgcggcgaaaggttctacaagcagcaatcaag
gctctcgatgataagaaaagggctgttcgtcaagaggctgttcgatgtcgacaaacatgg
cagtcgtttgcttaa

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