KEGG   Setaria viridis (green foxtail): 117844596
Entry
117844596         CDS       T07951                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117844596
   03400 DNA repair and recombination proteins [BR:svs03400]
    117844596
Enzymes [BR:svs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117844596
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117844596
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    117844596
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_2 Prok-RING_4 ResIII DEAD zf-RING_UBOX zf-ANAPC11 zf-rbx1 zf-RING_4 Rad50_zn_hook HDA2-3 RING_XB3-XBAT31 TRAF3_RING zf-Nse zf-C3HC4_4 U-box
Other DBs
NCBI-GeneID: 117844596
NCBI-ProteinID: XP_034581211
LinkDB
Position
2:45494351..45498513
AA seq 832 aa
MAAASSSGGGGAGDDHEPYLLGFIVSKIVGMRHYTAKVAGRENVNLVREPLNPYDGNAIA
VHNGRNEKVGHIPANVAKALAPLLDSDLLVAAHGIVPRTDSRINRDDFKPHMLPCQVHLF
ARPDAAAVVEVALYEAELDLIHPNHPEFALSQSAAVMERTKKADRDVDKLFSLVGGKEGK
ARIDPMEAPGDVVLSELFDHQKEALGWMVHREESGDLPPFWEETEDGVFENVLINQKTEE
RPPPLKGGIFADDMGLGKTLTLLSLIGRTKARNVGVKEAKRAKRRRVEDAGEGPRPTLVV
CPPSVFSSWVTQLEEHLEPGSLKVYMYHGERTRDKKELLKYDLVLTTYSILGTEFEQEDS
PVKHIEWFRVILDEAHVIKNSTARQTKAVIALNAERRWVVTGTPIQNSSFDLYPLMAFLK
FQPFSIKSYWQKLIQRPLEKGNKTGLSRLQNLLGAISLRRIKETDIGTKSIVELPPKTVL
ECCIDLSAEEREIYDRMELEVKNKMQEFGDRDSILRNYSTVLYVILRLRQLCDDVSLCPL
DVKSWLPSNSLEDVSKNPELLKKLASLVDDGDDFDCPICLSPPTKTVITSCTHIYCQTCI
VKILKSSSSRCPICRRSLSKEDLFLAPEVKHSDEDGAGNPVSDRPLSSKVQALLKLLKTS
QNEDPSSKSVVFSQFKQMLILLEAPLKNAGFNILRLDGSMSMSKRLQVIKQFAHGGPDSP
TVLLASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQKKEVKVIRLIIKDS
IEERILSLQEKKKQLISSAFGKKGAKGDKEMRVEELRMMLGLDKGRPAGCWW
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggccgccgcctcctccagcggcggcggcggcgcgggcgacgaccacgagccctacctc
ctgggcttcatcgtctccaagatcgtcggcatgcgtcactacacagccaaggtcgccggc
cgcgagaacgtcaacctggtccgggagccgctgaacccttacgacgggaacgccatcgcc
gtccacaacggccgcaacgagaaggtcggccacatccccgccaacgtcgccaaggcgctc
gccccgctcctcgactccgacctcctcgtcgcggcgcacggcatcgtgccccgcacggac
tccaggatcaaccgcgatgacttcaagccccacatgctcccctgccaggtccacctcttc
gcgcgccccgacgccgccgccgttgtcgaggtcgcgctctacgaggccgagctcgacctc
atccaccccaaccaccccgagttcgccctctcccagtccgccgcggtcatggagcggacc
aagaaggccgaccgggacgtcgataagctgttctcgctcgtggggggaaaggaagggaag
gcccggattgatccgatggaggcgcccggggatgttgtgctatcggagctgttcgaccat
cagaaggaggcgctggggtggatggtgcacagggaagagtcgggagacctgccgccgttc
tgggaagaaactgaagatggggtattcgagaatgtgcttatcaatcagaagacagaggag
cgtccgccgcccctgaagggtggcattttcgctgatgatatggggctagggaagactctc
acgctgttgtcgttgattgggaggactaaagctcgcaatgtgggtgtcaaggaggctaaa
agggcgaagaggaggagggttgaggatgcaggggagggaccgcggccgacgcttgtggtg
tgcccgccctcggtgttctcatcttgggtgacacagctggaggagcacttggaaccaggc
agcttgaaagtgtatatgtaccatggggagcggacaagagataagaaggagctgttgaaa
tatgatcttgttcttaccacttacagcatcttggggacagaatttgagcaggaggactca
ccggtgaaacatattgagtggttccgcgtgattctggatgaagcccatgtcataaagaat
tctacagcacggcagacaaaggcagtgattgctctgaatgcagagaggcggtgggtggtc
actgggacgccaattcagaacagctcatttgatctataccccttaatggcatttttgaag
ttccagcctttctcaatcaagagctactggcagaaattgatccagcgccccttggagaaa
gggaataagactgggttgtcacggttgcaaaacctcctaggtgcaatctcactgcgcaga
atcaaagagacagacattggaaccaagagcatagttgagcttccccctaaaactgtttta
gaatgctgtattgatctttctgcagaggagcgtgagatctatgatcggatggaattggaa
gtgaaaaacaaaatgcaggaatttggtgacagagattcaattttgcgtaattattccact
gtgctttatgtcattctgaggctccgccagctgtgtgacgatgtctcattatgtccttta
gatgtgaaatcatggcttccctccaactcccttgaagatgtgtctaaaaacccagagcta
ttgaagaaactggcttcattggtagatgatggagatgactttgactgtccaatttgcctc
tccccacctactaaaactgtcataaccagctgcactcacatatactgccaaacctgcatt
gtgaaaatcctcaagagctcgagttcccgttgcccaatatgccggcgctccttatctaaa
gaggacctcttccttgctccagaggtaaagcattccgatgaagatggagcaggcaaccct
gtgtctgacagacccctctcttccaaggtgcaagccctactgaagctgctgaagacttca
cagaatgaagacccctcgtcgaagtctgttgttttttctcagttcaagcagatgttgatc
ttgctggaagcgcccctaaaaaatgcaggctttaatatactgcgtcttgacgggtcaatg
agcatgagtaagaggttgcaagtcatcaagcagttcgcccacggtggccctgactctcca
accgtgctacttgctagcctgaaagctgcgggagctggcgtgaacctgacggctgcctca
acggtgtacctctttgacccctggtggaaccccggggtggaggaacaggccatggacagg
gttcaccgtatcggtcagaagaaagaggtgaaggtgatacggctcatcataaaggacagc
atcgaggagaggatactgtcgctgcaggagaagaagaagcagctgatcagcagtgcgttc
gggaagaagggggccaagggtgacaaggagatgcgtgtggaagagctccggatgatgttg
ggcctggataagggaaggccggccggctgctggtggtag

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