Setaria viridis (green foxtail): 117844621
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Entry
117844621 CDS
T07951
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117844621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svs04040
]
117844621
Ion channels [BR:
svs04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117844621
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117844621
NCBI-ProteinID:
XP_072149052
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Position
1:1220768..1225278
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AA seq
636 aa
AA seq
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MKSTARVLDPQGPFLQTWNKIFVISCLVSVSVDSLFFYAPAVDGDNNCLYLDDKLDKIAS
ILRSLTDIFYLLRMIFQFRTGFTASSSRVFGHGVLVDDTFEIAKQYFTTYFLVDFLAVLP
LPQVFVLLVRPHLRGSEVMTEKNILTLIVICQYVPRLIRIIPLYIQITRSAGTVMDTAWP
GAAFNLLVYILASHVLGALWYILAIQRQDICWREACNGQDGCDLASLYCGSSVYGNNTFL
QDACPTNGDADIDPIFGIYLPVLQNVSQSTGFFEKLFYCFWWGLQNLCSYGQNLKTSTYI
WENLFAVFVSTSGLVLFALLIGNVQTYLQSASGHIEEMRVKRRDTEQWMAQRLLPEDIKE
RILRHDQYKWQETQGVDEEDLIINLPKDLRRDVKRHLCLLLLMRVPMFENMDDQLLDAMC
DRLKPMLCTEGSCIIREGDPVNEMLFIMRGTLESMTTNGGRMGFFNSNVLKGGDFCGEEL
LTWALDPTSGSNLPSSTRTVKTLSEVEGFALRADQLRFVATQYRRLHSKQLRHTFRFYSQ
QWRTWAACFIQAAWHRYCRKKMEDSLYEKERRFQAAIVSDGSSSRSLGAALYAAHFACNM
VRVLRRNAARKARLLERVPSRLLQKPAEPNFFAEEE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccacagcaagagttcttgatcctcaggggccattcttgcagacatggaacaag
atattcgtgatatcatgccttgtttcagtttctgtggactctctgttcttctatgccccg
gcggttgacggcgacaacaactgcttgtatctggatgacaagttggacaagatagcaagt
atcctgcgctctctcacggatatcttctatttactccgtatgatatttcagttcaggaca
ggatttactgcttcctcttcaagagtgtttggtcacggtgtattggttgatgacacgttt
gaaatagcaaagcagtattttacaacatattttctggttgatttcttagctgttctgccc
ctccctcaggtgtttgtgctgttagtgcgaccccatctccgaggttctgaggttatgaca
gagaaaaatatactaacgttgatagtcatatgccaatatgtacctcgactgatccgaata
ataccactctacattcaaatcacaagatcagctggtacagttatggatacagcatggccg
ggtgctgcctttaaccttctagtttatatacttgccagtcatgtccttggagctctttgg
tacattcttgccattcaacgacaagacatctgttggagagaagcgtgtaatggacaagat
ggttgtgatcttgcgtctttatattgtggaagttctgtatatggaaataatactttctta
caagatgcttgcccaacaaatggtgatgccgatatagatccaatctttggaatttaccta
ccagttctccagaatgtttcacagtcaacgggtttcttcgaaaaattattctactgcttt
tggtgggggctacaaaatctatgttcgtatggtcaaaacctgaaaacaagcacttacata
tgggagaatctgtttgctgtatttgtctcaacatcaggtttagttttatttgcgctcctt
attggtaatgtgcagacctatttacagtcagcctctgggcatatagaagaaatgagagtg
aaaagacgtgacacagagcaatggatggcacagagactacttcctgaggatatcaaggaa
cgaatactgcgtcatgatcaatataaatggcaagaaacacaaggggttgatgaagaggac
cttattataaatcttcctaaggacctcaggagagatgtaaagcgtcatctttgtctacta
cttctcatgagggttccaatgtttgaaaacatggacgatcagctcttggacgccatgtgt
gatcgtctaaagcccatgctgtgcacagaaggaagctgcatcattcgcgaaggcgaccca
gtgaatgagatgctcttcatcatgagaggaacactagagagcatgacaacgaacggtggg
cggatgggcttcttcaactccaatgttctcaaaggcggcgacttctgcggcgaagagctc
ctcacatgggctctggatcccacatcaggctcaaaccttcccagctcaaccaggacagtg
aagacgctgtcggaagtcgaaggtttcgccctgagggctgatcagttgaggtttgtggcc
actcagtaccggaggctccacagcaaacagctccggcacaccttcagattctactcccag
caatggaggacctgggctgcttgcttcatacaggcagcttggcacagatactgcaggaag
aagatggaggatagtttgtatgagaaagagaggaggttccaagcggctatagtgagtgat
ggctcaagttctcgcagtcttggcgcagcactctatgccgcacatttcgcttgcaacatg
gtgcgagtgctacggagaaatgccgcacgaaaggcccgtttgctggaaagagtgccttca
aggctgttgcagaagccagcagaacccaactttttcgctgaagaagagtga
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