Setaria viridis (green foxtail): 117844643
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Entry
117844643 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117844643
Membrane trafficking [BR:
svs04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117844643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
117844643
NCBI-ProteinID:
XP_034581269
LinkDB
All DBs
Position
2:44242371..44245980
Genome browser
AA seq
462 aa
AA seq
DB search
MGTPDEMMAYSSLSKIDTSQNQRAALSNVVAGNNYPPQDYLYEPSFEPDFPEYDSRDDPF
TPTRASPKVNLKSVLGGLVSIVTGANKSEDDASQQQSFSTDISFLGSGNDGDVDVHPSVC
VPSAPPLLEANALQYSAYREVLLADPPEWLPDSSANACLQCNLPFTALTRGRHHCRFCGG
IFCKDCSKGRCLMPMKFRIRDPQRVCDACYERLDPLQGLLINYNSNSMQPAKHDVMDWTS
TRSWLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGA
VLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLRDRKAVKAFSSR
IHLSLGAGLSAAAGPIGRAFEADVRASEKGSGICYSYSCSKGAFVGVSLEGNIVTTRSET
NLRFYGDAYLTTTDILFGRVERPRAAQPLYSALDDLFSKMVC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccagatgaaatgatggcatactcttccctgtcaaaaattgataccagccag
aaccagagagctgctctgtccaatgtagttgctggaaacaactacccgcctcaggattat
ctctatgagccatcatttgaaccagacttcccagagtatgattcgagggacgatccgttc
actccgacacgagctagtccaaaagtcaatctgaagtctgttctaggtggactggtttca
atcgtcacgggtgcaaacaagagcgaggacgatgcatcgcagcagcaaagtttcagcaca
gatatatcgtttcttggatctggcaatgatggcgacgttgatgtgcacccatctgtctgt
gttccaagtgcaccaccactgcttgaagcaaatgctttgcaatatagtgcatacagggag
gtgttgctagcggatccaccagagtggttgccagatagctctgctaatgcctgcctgcag
tgcaacttgcctttcacagctctgactcgtggaaggcaccattgccggttctgtggaggt
atattctgcaaagattgctccaagggaagatgtttgatgcccatgaaattcagaattcgt
gatcctcagagggtttgtgatgcttgctatgagaggcttgatccacttcagggcctattg
atcaactacaatagcaactccatgcagccagcaaaacatgacgtcatggattggacaagc
actagaagctggttgaacatgcctgttggtgtatcaatggagtatgaaatatacaaggct
acaaacacaatgaagaaatattgtcaggttgctaggttaaaccctgagaagtccatccca
tcatctattctcaagggagcaaagggacttgcaattctaacagtcgccaaggcgggtgca
gttcttacatacaaagttggcactggtcttgtagttgctcgcagatcagatggatcatgg
tctgccccgtcagcaattttatctgttggactgggatggggagtgcagatcggaggagaa
ctgacggattttatcattgtgcttcgtgaccgtaaagctgttaaggcattcagcagtcgc
attcatctttctcttggggcaggattgagtgctgcagcagggccaataggcagagccttt
gaggcagatgttcgggccagcgaaaaaggttccggaatatgctactcctacagctgcagc
aaaggtgcgtttgttggggtttcactggaagggaacattgtgacaaccagatcagagacc
aatcttcgtttctacggcgacgcttacctgaccacaaccgatatcctgtttgggagggtg
gagaggccccgagccgcccagcccctgtactcagctctagacgatctgttctccaaaatg
gtctgctag
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