Setaria viridis (green foxtail): 117844673
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Entry
117844673 CDS
T07951
Name
(RefSeq) histidine--tRNA ligase, chloroplastic/mitochondrial
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117844673
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117844673
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117844673
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
117844673
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117844673
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117844673
Prokaryotic type
117844673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
DUF4473
Motif
Other DBs
NCBI-GeneID:
117844673
NCBI-ProteinID:
XP_034581317
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Position
2:complement(15281644..15286210)
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AA seq
487 aa
AA seq
DB search
MAAWSSSPSLRHLLLLRPRLPLSPTCLAGSFSRRHIHSHSRRRFLSSASSSMLTHGDEAS
THVDANGVVDVNPPRGTRDFPPEDMRLRTWLFDQFREVSRLMAFEEVDFPVLESEALFIR
KAGEEITQQLYNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERM
TRGRRREHYQWNMDIFGVPKVRAEAELLQAIVLLFQRLGITSSDVGIRVSSRKVLLAVLN
MYSIPEHLFTQVCVIVDKFGKLTREEIEKELMSTGLSSEAVQGIIEVLSLKSLSKLEEVL
GSGVEAVADLKKLFSFAEQYGYADWICFDASVVRGLAYYTGIVFEAFDREGKLRAICGGG
RYDKLLSTFGSEDIPACGFGFGDAVIVELLKEKGLLPDMSRQIDDIVFPLDEVLEGPASS
IASSLRKKGRAVDLVEDKRLKWVFKHAERINASRLILVGNSEWERGMVRVKILSTREEYE
VKADELD
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtggtcgtcctcgccgtcgcttcgccacctcctcctcctccgcccgcgctta
cccctcagccccacctgcctcgcgggctccttctcccgccgccacatccacagtcacagc
cgccgccggttcctctcctccgcatcctcctcgatgctgacccacggcgacgaggcctcg
acccatgttgatgccaatggcgtcgtcgacgtcaacccgccgcgcggcaccagggacttc
ccgccagaggacatgcgcctccgcacctggctgttcgatcaattcagggaggtctcccgc
ctgatggccttcgaggaggtggacttccccgtcctcgagtcggaggcgctcttcatccga
aaggcaggggaggagatcacgcagcagctctacaacttcgaggataaagggggtcgacgt
gttgttctcaggcccgaaatcaccccttccctagcgcgcctagtcataaagcaaggaaaa
tcagtctcccttccactgaaatggtttactataggacaatgctggcgatatgagcgcatg
accagagggagaaggcgggagcattaccaatggaatatggatatctttggtgtccctaaa
gttcgggctgaggctgagcttcttcaggctattgttctcttatttcaacgtcttggaatt
acatcttcggatgtggggatcagggtgtccagcaggaaggttcttctggctgtgttgaac
atgtactccataccagaacatttattcactcaagtttgtgttattgttgataagtttgga
aaattgactagggaagaaattgagaaggaacttatgtcaactgggctgtcatctgaagct
gtccagggtatcattgaagtgctttcgctcaagtcattgtccaagcttgaagaggtgcta
ggctctggtgttgaagctgttgctgacttgaagaaactcttctcatttgcggagcaatat
ggttatgctgattggatttgttttgatgcgtcagtggtccgtggccttgcatactacacg
ggaattgtatttgaggcatttgatagagaaggaaaactgagagcaatttgtggcggtgga
aggtatgataaattgctttcaacatttggaagtgaagatattccagcttgtggctttgga
tttggagatgctgttatagtggaactgctgaaagaaaagggtctgttgcctgatatgtca
cgtcagatagatgacattgtcttccctttggacgaagtgctcgaaggaccagcatccagt
attgcttcttctctgaggaagaaaggccgagctgttgaccttgtagaagacaagcgtctc
aaatgggtatttaagcatgcggagaggatcaatgctagcaggctgatattggttggaaac
tccgagtgggagcgaggtatggttcgtgtaaagatactatcaaccagggaagaatacgag
gttaaggcagatgaactagactga
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