Setaria viridis (green foxtail): 117844677
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Entry
117844677 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14411
RNA-binding protein Musashi
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117844677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117844677
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117844677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117844677
NCBI-ProteinID:
XP_034581321
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Position
2:complement(6017771..6024122)
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AA seq
471 aa
AA seq
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MEAANYSGKLFVGGISWETDEDRLREYFGGFGEVTEAVIMRDRSTGRARGFGFVVFSDAS
VAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVT
EADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV
KRAVPKEQSPGPVARSPAGAGQSYAMNRFLNGFNQGYNPNPIGGYGMRVDGRYGLLSGAR
NGFSSFGPGFGMGMNVEGGMSGTFGANSGFINSSNGRQMGSYYNGSSNRLGSPIGYLGLN
DDSGSMLSSMSRNVWGNGSLNYPSNPTNMNAFASPGNGGQVGITGDNWGGLPSAHGMGNI
SSLGSGNLGRGAGDNNFGLPSGSYGRSNSTGTIGEPFSASGNTYEVNNPDTYGSSSIYGG
TAWRFASSEVDIPSFGHDLGNIDPNIKSDVSASYMGNYTVNNNQPSRGITS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccaactactccggaaagctcttcgtcggcggcatctcgtgggagacggac
gaggaccgcctccgcgagtacttcggcggcttcggggaggtcaccgaggccgtcatcatg
cgggaccgcagcacgggccgcgctcgtgggttcgggttcgtggtcttctccgatgcgtcg
gtggcggagcgggtgaccatggacaagcacatgatcgacgggcgcatggtggaggcaaag
aaggccgttcccagggacgaccacagtatcgtgagcaagagcaatgccagcagcataggg
tcacctggaccgggccgtactagaaagatctttgttggaggtttgccctcaaatgtcaca
gaggctgacttcagaaggtactttgagcaattcggtgtcataaccgatgtggttgtgatg
tatgaccacaacacgcagaggccgaggggctttggattcatcacctatgattcagaagat
gctgtggacaaagctctgcacaagagcttccatgagctgaatggtaaaatggttgaggtc
aagagggctgttccaaaagagcagtctcctggacctgttgcacgctctcctgcgggagca
gggcagagctatgctatgaaccgcttcctgaatggcttcaaccagggttacaacccgaac
cccataggaggttatggcatgagggtggatggaaggtatggcctgctttcaggtgcacgg
aatgggttctcttcttttggcccaggttttgggatgggcatgaatgttgaaggtgggatg
agcggaacttttggtgcaaactcaggtttcatcaacagttccaatgggaggcaaatgggt
tcgtactacaatggaagttcgaacagattgggtagtcctattgggtaccttggcctcaat
gatgattcaggatcaatgttgagttcaatgtctaggaatgtttggggtaatgggagtcta
aactacccgagcaatcctacaaacatgaatgcttttgcttcacctggaaatggaggtcaa
gtcggtattactggtgacaattggggaggtctcccttctgctcatgggatgggcaacatt
tcaagccttgggtcagggaaccttggccgtggagctggagataataactttggtttgcct
tctggcagctatgggaggagcaactcaactggtacaattggtgaacctttctctgcatca
ggcaatacatatgaagtgaacaaccctgatacatatggtagcagctctatttatggtggc
acagcctggaggtttgcatcatctgaggttgacataccttcttttggccatgatcttgga
aatattgatccaaatatcaaatcagatgtatcagcaagttacatgggcaactatactgtt
aacaacaatcagccaagcagaggtatcacttcctag
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