Setaria viridis (green foxtail): 117844685
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Entry
117844685 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117844685
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117844685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117844685
NCBI-ProteinID:
XP_034581329
LinkDB
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Position
2:45221361..45231920
Genome browser
AA seq
706 aa
AA seq
DB search
MAGLGGGGWGGYYDDDDWDLSAEQLDQIERDAIRQLAERKASSSAASTAPVPAPALGAVS
PLPSRATAPAAAASSPLGGNHPAARASLEARFGKVEALSPMRNAVNNSQGSAPKVSVHLF
LHSSGVIAAKFPYHQLLVDACRKIPKASWNAKERIWMFPPSSLSIAEEVLDSVHGLAVEV
RKLDPLVQRALVAALASKDLRGFYDRIPPEVESKLMPFQREGIRFVLQHGGRALIADEMG
LGKTLQAIAVASCLHDAWPVLVIAPSSLRLQWASMIQSWLNIPMEDILVVLPQTGGSHKA
GFRLVYSNTKGDFRLDGVFNVISYDVVPKIQSTLLDLDFKIVIADESHFLKNGQAKRTIA
SLPVLQKAQYVILLSGTPALSRPIELFTQLQALYPTVYKNVSEYGNRYCKGGFFGVYQGA
SNHEELHNLMKATVMIRRLKKDVLSQLPVKRRQQIFLDLSEKDVKYVRALFHELETLKIK
IESADSKEMIDSLKFTQKNLITKLYTDSATAKIPAVLDFLGTVIEADCKFLIFAHHQNMV
EAIEQYLLKKKVKCIKIDGQTPVTTRQTLVTDFQNKDDIRAAVLSIRAGGYGLTLTAAST
VIFAELSWTPGDIIQAEDRAHRIGQVSSVNIYYLLSNDTIDDLMWDAVQGKLENLGQMLD
GQENTLDVSQIDSRPSPSKQQKTLDGFLKRCSTSTEGQPSTKHPRF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctcggcggcggaggctggggcggctactacgacgatgacgactgggacctc
agcgcggagcagctggaccagatcgagcgggacgccatccgccagctcgccgagcggaag
gcctcctcctccgcggcctccaccgcccccgtccccgcccccgcactcggggccgtctcg
ccgctcccctcccgcgccaccgcgccggcggcggccgcctcgtcgcctctcgggggtaac
caccccgctgccagggcctctttggaggcccgcttcggcaaggtagaagcactttctcct
atgagaaatgcagtgaataatagccagggcagtgcacctaaggtatctgtacatcttttc
ctccattctagcggtgtgattgcagcaaagttcccataccaccagttacttgtggatgca
tgtcgcaagatcccgaaagccagctggaatgcgaaagaaaggatatggatgttccctccc
tcatctttatcaatagcagaggaggttcttgattcagtgcatggattagctgtagaggtt
cgcaaattggatcctctagttcagcgtgctttagtggctgctttagcctccaaagatctt
cgaggtttctatgacaggattccccctgaagttgagtcaaagcttatgccatttcagcgt
gaaggcatcaggtttgttttacagcatggtggcagagccctgattgcagatgaaatgggt
cttggaaagacattacaggcaattgctgttgcttcttgccttcatgatgcctggccagtt
cttgtaatcgctccatcttccttgcgattgcagtgggcatctatgattcagagttggctt
aacatccccatggaagatatcttggtggtattgccacaaactggaggatcacataaggct
ggattcagattggtttactcaaacactaaaggagattttcgcttggatggggttttcaat
gtgatatcttacgatgtagttcccaaaatacaaagcacacttctggatttggatttcaag
attgttatagctgatgaatcacattttctgaagaatggccaagcgaagagaacgattgct
tcacttcctgttctgcagaaagctcaatatgtcattttgcttagcggaactcctgctttg
tctcgcccgattgagctgtttactcagctccaggcactgtatcctactgtgtacaagaat
gttagcgagtatggcaatagatattgcaagggtggctttttcggggtgtatcaaggtgct
agcaaccatgaggagctgcataatctgatgaaagcaactgtcatgatccgtaggttgaaa
aaagatgtcctttcacagttgcctgttaaacgtagacaacagatctttctagatttaagt
gagaaagatgtgaaatatgtccgtgctctgtttcatgagttggagactctgaagatcaaa
atcgagtccgctgactccaaggagatgattgactctctcaaatttactcaaaagaacctt
atcactaagctctacactgattcagccacagccaaaattccagctgtgttagatttcctg
ggcactgtaattgaggcagattgcaagttcttaatatttgctcatcatcaaaacatggtt
gaggccatcgaacaatatctcttgaaaaagaaagtgaagtgtatcaaaattgatggccag
acgcctgtaactacaagacaaaccttagtcacagatttccaaaataaggatgacatcagg
gcagctgtgttatccatcagagctggaggctacgggttaactttgacagcagcaagtaca
gtaatctttgctgagttatcatggactcctggcgacattattcaagctgaagatcgtgcc
caccggatcggtcaagtttcatcagtcaacatttattaccttctctcaaatgacactata
gatgatcttatgtgggacgctgttcaaggcaaacttgaaaatctgggacagatgctggat
gggcaggagaatacgctggatgtttcccagatcgactccaggccaagcccctcaaagcag
cagaagacgcttgacggcttcctcaagcggtgcagcacctccacggagggtcagcccagc
acgaagcaccctcggttctga
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