Setaria viridis (green foxtail): 117844778
Help
Entry
117844778 CDS
T07951
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 5
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117844778
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117844778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAR1
MULE
GATA
ZSWIM1-3_RNaseH-like
SWIM
Transposase_mut
Motif
Other DBs
NCBI-GeneID:
117844778
NCBI-ProteinID:
XP_034581455
LinkDB
All DBs
Position
2:44169992..44174798
Genome browser
AA seq
705 aa
AA seq
DB search
MMHMLVAPDGGGGELHPYGAPPAPVEQELELLRDTADDGLEGHVRCLRCGISGNATPHMR
RGPDGPRTLCNACGIAYRKGKMRRMIEAEPPIDEAALAKLVPEVGMEFESEEKAYEFYNK
YAGHIGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSLEAKKPRLDTRIGCPARLII
KVTPECKYRVTDFKAEHNHQLAPPSTMHMLRSQRILTELQSGEAELSDDSVVTPTTKATG
DLVVRQVSFLRNISLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTTQI
DEDDRLTNFFWADPKSRDDFNYFGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAA
MLYDESFESYKWLFESFKIAMHGKQPTVALIDQSIPLSSAMAAAWPNTTQRICAWHIYQN
SLKHLNHVFQGSKTFAKDFSKCVFGYEDGDEFLFAWRSMLEKYDLRHNEWLSKVFDEKEQ
WALAYDRHIFCADIISALQVESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQADF
QASQSYPRIPPAKMLKQAAHTYTPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSE
KPKEHFVRFDSSDCSCVCTCRKFEFMGIPCCHMLKVLDYRNIKELPQKYLLKRWRRTAKS
TNEDNEGNATNANGSSLNVPAPAANHHGLQSFSAMIQDASVSSMH
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacatgctggtggccccggatgggggcggaggggagcttcatccgtacggcgcg
ccgccggcgccggtggagcaggagctggagctcctccgcgacaccgccgacgacggcctc
gagggccacgtgcggtgcctgcggtgcgggatatctggcaatgcgacgccccatatgcgg
cgtggccctgatggcccaagaactctttgcaatgcgtgtggcattgcttacaggaagggt
aaaatgagaagaatgatagaagctgaaccgcccatagatgaggctgcactcgcaaagcta
gttccagaagtaggcatggaatttgagagtgaggaaaaggcatacgaattttacaacaaa
tatgctggccatattggctttagtgttagaaaaagtacatcacataaatcttctgaaaat
attaccaaagtaaggacttttgtgtgctcaagagaaggctacaacagggataaaaaatca
ctggaagcaaagaagccaagattggatacacgaattggttgcccagcgagattgattatt
aaagtcacaccggagtgcaagtatagagtgaccgatttcaaagcagaacacaatcatcag
ctggcccctccttctacaatgcatatgttaaggtcgcagaggatattgacagaacttcag
tctggagaagcagaactatcagatgattctgtagtgacaccaacaacaaaagcaactggt
gatcttgttgtgagacaagtcagtttccttcggaacatctctctccttccagctgattac
aagaattatctccgttcgaagcgtatgaaggctatgcaacctggtgatggtggagcaata
ttgaaatatctgcagacaatgcaaatggataacccctcgttcttttacactacgcagatt
gatgaggatgacaggctgactaactttttttgggcagacccaaaatcaagagatgacttc
aactacttcggtgatgtactctgcttagacacaacatacaaaataaatggatatggtagg
ccacttgcattgttccttggtgtgaatcatcataaacaaacaattatttttggtgcagct
atgctttatgatgaatcatttgaatcatacaagtggctttttgagagttttaagattgct
atgcatggaaaacagcctactgtagctttaatagatcaatctattccattgagtagtgca
atggcagcagcctggccaaataccacacaacgaatttgtgcttggcatatatatcagaat
tctcttaagcatctcaatcatgtcttccaaggttcaaagacatttgcaaaggactttagc
aaatgtgtctttggctatgaggatggagatgaattcttgtttgcatggagaagtatgcta
gaaaagtatgatcttagacataacgaatggctgtctaaagtgtttgatgagaaggaacaa
tgggccttggcatatgataggcatatattttgtgctgacatcataagtgcacttcaagtc
gagagtttcagtagtattttgaagaagttcttgagtcctcaactggaactactgtccttc
ttcaagcactatgaaagagcagtggatgaacatcgctatgctgagctgcaagctgacttc
caagctagtcagagctatccaagaatacccccagccaagatgctaaagcaagctgctcat
acatatacaccagtggtgtttgagatctttcgtaaagagtttgagctattcatggactct
gtgttattcagttgtggggaggctgggacaacatctgagtacaaggttgcttcatctgag
aaacccaaggaacactttgttcgatttgattcaagcgattgctcctgtgtgtgcacttgt
aggaagtttgagtttatgggcatcccatgttgtcacatgctgaaggtgctggactacaga
aatatcaaagagctacctcaaaaatatctgctgaagcgatggaggaggactgccaaatct
acaaatgaagacaacgaaggcaatgcaacaaatgctaatggatcatcattgaatgttcct
gctccggctgcaaatcaccatgggcttcaaagcttcagtgcaatgattcaagatgcatct
gtttctagtatgcattag
DBGET
integrated database retrieval system
