Setaria viridis (green foxtail): 117844791
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Entry
117844791 CDS
T07951
Name
(RefSeq) ubiquitin homeostasis protein lub1
KO
K14018
phospholipase A-2-activating protein
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117844791
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GFIT
Motif
Pfam:
PUL
WD40
PFU
WD40_Prp19
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
117844791
NCBI-ProteinID:
XP_034581470
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Position
2:complement(1969304..1978082)
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AA seq
755 aa
AA seq
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MAEYRLGVQLHGHADDVRGICVCGDAGIATSSRDRTVKFWTRNPEKESEYVLSKTLAGHS
SFVGPLAWIPPSDRFPEGGIVSGGMDTFIFLWDLHKGEVVETMKGHNSQVTGLAVDTNGD
IISSSMDCTVRRWRNGNAIEVWEAHKVAVQTVLKLPTGELFTGSSDSTIKLWKGRTCIQT
FSGHADTVRCLAEMPGLGILSASHDSTVKLWALTGQPLLEMIGHSSLVYSVDAHSSGLIA
SGSEDRSLKIWKDGVCVQSIEHPGCIWDVKFLENGDIVTACSDGTARIWTTHANRFCSDE
ELAAYTDLISQYTLSRKTVGGLKLMDLPGVEALQVPGTSDGQTLIVREGDNGVAYSWNSA
ELKWDKIGEVVDGPGDAAQGQVHDGVRYDFVFNVDIGDGEPIRKLPYNRSDDPYAVADKW
LLKENLPLTYRQQVVEFILQNSGQNNFVPDPSFRDPYTGANAYVPGGQPSSSNGNAPKQI
FKHIPKSGMLSFETAQFDGILKKVTEFNTTLSSDSEQKQLSLSEAEMSRLPAIVKVLKET
SFYHTSKLADADMALLVKILKSWPSKMMFPVIDFLRMFVLHPDGAALLLKTIETENDVLM
ETLRKAVAPPVQPANLLTILKALTNLFDNSCLHQWLRTHSAEIIDSMSNCKSSFSKNAHL
AYATLLLNYAVLSIESKDEQSQAQILSAALEIAEDDTQDFDSKYRALVAIGSLMQKGNVK
SLALDLDVKSVASSAKASMDSKIAEVGADIELLTR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtaccgcctcggcgtccagctgcacggccacgccgacgacgttcgtggcatt
tgcgtatgtggtgatgctgggatcgcaacgtcatcaagagatcggacagtgaaattctgg
acacggaacccagaaaaggagagtgaatacgttctctctaagaccctcgcaggacattca
agttttgtgggcccattggcttggatccctccttcagaccgctttcctgaaggaggaatt
gtttctggtggaatggatacatttattttcctctgggatctgcataaaggagaagttgtt
gagacaatgaagggacacaattcacaagtcactggacttgctgtagacactaacggtgac
atcatctcttcatcgatggattgtactgtaagacgctggagaaatggcaatgctatagag
gtttgggaagcgcacaaggtcgcggtgcagactgttctaaagctgcccacaggagaactt
tttactggttcaagtgattccactattaagctttggaaaggaaggacttgtatacagaca
ttctcaggacatgcagatactgttagatgtttagcagaaatgccaggtctaggaattctt
tctgcctcgcatgacagcactgtcaagttatgggcgttgacaggtcagcccctgctggag
atgattgggcattcatctcttgtatattctgtggatgcacattcttcaggtcttattgct
agtggcagtgaggatcgttctttgaagatatggaaagatggagtttgtgttcaaagcatt
gaacacccgggatgcatatgggatgttaaattcttggaaaatggagatattgtaactgct
tgttctgatggtactgcaaggatatggacgacccatgctaacaggttctgcagtgatgag
gaacttgcagcttatacagatcttatttctcaatacactcttagcagaaagaccgttggt
ggactcaagttgatggatctaccaggggttgaggcactgcaagttccagggacctctgat
ggccaaacattgattgttagagaaggggacaacggtgttgcatattcatggaattcagca
gagctaaaatgggacaaaattggtgaagtagttgacggacctggggacgctgcacaaggc
caggttcatgatggtgttcggtatgattttgtttttaatgttgatattggagatggagaa
cctatacgaaaattgccctataatcgttcagatgatccatacgcagtcgcggacaagtgg
ctcctgaaagaaaatctgcccttgacatatcgccaacaggtggtagaatttatactgcag
aattctggccagaataactttgttccagatccatcttttcgggatccctacactggggct
aatgcgtatgtacctgggggacaaccatcttcatcaaatggtaatgctccaaaacaaatt
tttaagcacatacccaagagtggaatgctgtcatttgagacagctcagtttgatggaatc
ctgaagaaagttacagagttcaacaccacactttcatctgactcggaacagaaacaatta
tctctatctgaggctgagatgtcaagattacctgccatagtgaaagtattgaaagagaca
tcattttatcacacaagcaagcttgcagacgctgacatggcattgttggtaaaaatattg
aagtcttggccttcaaaaatgatgtttccagttattgattttctgagaatgttcgtgttg
catcctgatggagctgctttacttctcaagaccatcgaaactgaaaatgatgtacttatg
gagacccttcgtaaagctgtagcacctcctgtgcagccagcaaatttgcttacaatcctt
aaagctctgacaaatttatttgacaactcatgcttgcaccaatggttgaggacccacagt
gctgagatcattgattccatgtctaactgcaagtcttcgtttagcaagaatgcacacttg
gcatatgccacacttttactgaactatgctgttctttcaattgaatcaaaggatgaacag
agtcaggcgcaaattctttctgctgccctcgagattgcagaagatgacactcaagatttt
gactcgaaataccgggcactcgttgcaatcggttctcttatgcaaaagggcaatgtgaag
tcccttgctcttgaccttgatgttaagagcgttgcgagcagcgcaaaggcatctatggac
tcgaagatcgctgaagttggcgctgatattgagctgctaacaagatga
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