Setaria viridis (green foxtail): 117844793
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Entry
117844793 CDS
T07951
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117844793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117844793
03012 Translation factors [BR:
svs03012
]
117844793
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117844793
Translation factors [BR:
svs03012
]
Eukaryotic type
Release factors
117844793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
117844793
NCBI-ProteinID:
XP_034581472
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Position
2:complement(43183996..43187835)
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AA seq
437 aa
AA seq
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MSDSQETDRNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVARVAKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
VSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKHSASGEVTIKHLNKEQEADQSNFRD
ASTNAELEVQEKMSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDELSDDDGLYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagccaggagactgataggaacattgagatttggaagattaagaagctgatc
aaggcattggagtctgctagaggcaatggcacaagcatgatctctcttatcatgcctcca
cgtgatcaggttgctcgagtggctaagatgttaggtgatgaatatggtactgcttcaaac
atcaagagtagagttaatcgtcaatctgtgttggctgctatcacctcagctcaacagagg
ttgaagctctacaacaaagtgcctccgaatggattggttctctacactggaaccattgtt
actgaagatggaaaggaaaagaaagttactattgattttgagcccttcaagcctattaat
gtgtcgctgtacctttgtgacaacaagttccacactgaggctctaaatgagctcttagaa
tccgacgacaagtttgggttcattgtcatggatggtaatggtactctgtttggcacacta
agtggcaatacccgtgaagtgcttcacaaattctctgttgatctcccaaagaagcatggt
agaggaggacagtctgctttgcgttttgctcggcttcggatggagaaacggcacaactat
gtccgcaaaacagctgagcttgctacacagtttttcatcaatccagctactagtcagcct
aatgttgcagggctgattcttgctggttctgctgattttaagacagagctgagccaatct
gacatgtttgatcagcgacttcaagcgaagatacttaatgtggttgatgtttcttatggt
ggtgaaaatggtttcaaccaagctattgagttgtcagctgagatcttagcaaatgtgaag
ttcattcaagagaagaagctgattggcaagtattttgaagagatcagtcaggacactggg
aaatatgtctttggtgttgatgacaccctgaaggcacttgaaatgggtgctgtggagacc
ctgatagtgtgggagaatctggatatcaacagatatgtgctcaagcacagtgcctctggt
gaagttactataaaacatctgaacaaagagcaggaagctgaccagagcaatttccgtgat
gcatccaccaatgctgagctggaagttcaggaaaagatgtctctcttggaatggtttgct
aatgaatacaaaaagtttggttgttctctcgagtttgtcaccaacaagtctcaagaggga
tcacagttctgtaggggatttggtggcattggtggtatgttgcgctaccagctggatatc
cgctcatttgatgagctttctgacgatgatggtttgtacgaggactctgattag
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