Setaria viridis (green foxtail): 117844798
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Entry
117844798 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC6
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117844798
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117844798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117844798
NCBI-ProteinID:
XP_034581478
LinkDB
All DBs
Position
2:complement(36601456..36607953)
Genome browser
AA seq
860 aa
AA seq
DB search
MSFGGMFDGAGSGVFSYDGAGGGGGAGMHNPGRLIAAPPIPKPGGFGAPGLSLGLQTNMD
GGQLGDMGRMGMMGGGGSGSAGEGDSMGRGREDENDSRSGSDNVDGASGDELDPDNSNPR
KKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRLNLESRQVKFWFQNRRTQMKTQ
IERHENALLRQENDKLRAENMTIREAMRNPICANCGGAALLGEVSLEEQHLRIENARLKD
ELDRVCALAGKFLGRPISSGGPIPSLQGCSGLELGVGTNGFGLGPLGATSALHPLPDLMG
GGPVGSAGMRLPAGIGGLDGGIHGAAHGVERSVLLELGLAAMEELMKVAQMEEPLWLPSP
DGGGLETLNYDEYHRAFARVFGPSPAGFVSEATREAGVAITSSVDLVDSLMDAARWSEMF
PCIVARASTTDIISSGMGGTRSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAV
VDVSVDAVLRPDGGNNPHHQAQNGGAAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYD
ETAVHQLYRQLLRSGQALGARRWLASLQRQCQYLAILCSNSLPARDHAAITPVGRRSMLK
LAQRMTDNFCAGVCASAAQKWRRLDEWRGEGGGAAGNGAAGEGEKKVRMMARQSVGAPGE
PPGVVLSATTSVRLPSTPPQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKGQHHGNAV
SLLRPNATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPSGFA
ILPDGHSQPSSNTAQGSPNSQSSTVGSNSAGSLVTVAFQILVNNLPTAKLTVESVETVSN
LLSCTIQKIKSALQASIVTP
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcggtggcatgttcgatggcgccggctccggcgtcttctcctacgacggtgcc
ggtggcggcggcggcgcgggcatgcacaacccaggccgcctcatcgccgcgccgcccatc
ccgaagcccggcggattcggcgcccccggcctctccctcgggctgcaaacgaacatggac
ggggggcagctgggcgacatgggtcgtatgggcatgatgggcggcggcgggagcgggagc
gccggcgaaggcgactcgatgggccgcggccgggaggacgagaacgacagccggtcaggc
agcgacaacgtggacggcgcctccggcgacgagctcgacccggacaacagcaacccgcgg
aagaagaagaagagataccaccgtcacaccccgcagcaaatccaagaacttgaagctgtg
ttcaaggagtgcccccaccccgacgagaagcaacggatggagctcagcaagcggctcaac
ctagagagccgccaggtcaagttctggttccagaaccgccgcacgcagatgaagacgcag
atcgagcggcacgagaacgcgctgttgcggcaggagaacgacaagctgcgggcggagaac
atgacgatccgggaggcgatgcgcaaccccatctgcgccaactgcggcggcgcggccctg
ctcggggaggtgtccctggaggagcagcacctgcgcatcgagaacgcgcgcctcaaggac
gagctcgaccgcgtctgcgcgctcgccggcaagttcctgggccgcccaatctcctccggc
ggcccgattccgtccctgcagggttgctccggcctcgagctcggcgtcggcaccaacggc
tttggcctcggcccgctgggcgcgacgtcggcgctgcatcccctccccgacctgatgggc
ggcggccccgtgggctcggcgggcatgcgcctgcccgcgggcattggcggcctcgacggc
ggcatacacggcgcggcccacggcgtcgaacgcagcgtcctcctggagctcgggctcgcc
gcgatggaggagctcatgaaagtggcgcagatggaggagccgctttggctccccagcccc
gacggcggcggcctggagacgctcaactacgacgagtaccaccgcgcgttcgccagggtg
ttcgggccgagccccgccgggttcgtctccgaggccacccgcgaggctggcgtcgccatc
accagcagcgtcgacctcgtcgacagcctcatggacgcggctcggtggtcggagatgttc
ccgtgcatcgtggcgagggcgagcacgacggacatcatctcgagcggcatgggcggcacg
cgcagcgggtcaatccagctgatgcacgcggagctgcaggtgctatcgccgctggtgccg
atccgggaggtggtcttcctccggttctgcaagcagcacgccgagggcctgtgggccgtc
gtcgacgtctcggtggacgccgtcctccgccccgacggcggcaacaacccccaccaccaa
gcgcagaacggcggcgccgccgggtacatgggctgccgcctcctccccaccggctgcatc
gtccaggacatgaacaacggctactccaaggtcacgtgggtggtacacgcggagtacgac
gagacggcggtgcaccagctctaccgccagctgctccgttcagggcaggccctcggcgcg
cgccgctggctcgcctcgctccagcgccagtgccagtacctcgccatcctctgctccaac
tccctccccgcccgcgaccacgccgcaataacgccggtggggcggaggagcatgctgaag
ctggcgcagcggatgacggacaacttctgcgcgggcgtgtgcgcgtccgcggcgcagaag
tggcggcgcctggacgagtggcgcggcgaaggcggaggagctgccgggaacggcgccgcg
ggcgagggagagaagaaggtgcgcatgatggcgcggcagagcgtgggcgcgcccggggag
cctcccggcgtggtgctgagcgccaccacgtccgtgcggctgccctccacgcccccgcag
cgcgtgttcgactacctccgagacgagcagcgccgcggcgagtgggacatcctcgccaac
ggggaggccatgcaggagatggaccacatcgccaagggccagcaccacggcaacgccgtc
tccctcctccgtccaaatgcaacaagtggcaaccagaacaacatgctgatcttgcaagag
acttgcaccgactcatcgggctcgctggtggtgtacgcgccggtggacgtgcagtccatg
cacgttgtcatgaacggcggcgactctgcctacgtctcccttctcccatccggctttgcc
atcctccccgacggccacagccagccatcatccaacactgcccaaggctcgccgaacagt
caatcttccaccgttggtagcaacagcgctgggtccctggtcaccgtggcgttccagatc
ctggtcaacaacctgcccaccgcgaagctcaccgtggagtcagtggagaccgtcagcaac
ctgctctcctgcacaatccagaagatcaagtctgctctccaggccagcatcgtcacaccc
tag
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