Setaria viridis (green foxtail): 117844805
Help
Entry
117844805 CDS
T07951
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117844805
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117844805
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
117844805
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117844805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
117844805
NCBI-ProteinID:
XP_034581485
LinkDB
All DBs
Position
2:47063618..47068661
Genome browser
AA seq
643 aa
AA seq
DB search
MKAQPLLPAPLKRRRGPRVAVLALVLCSLLVPFAFLFDRAPTGGYVTTEERHRQEVVLPL
VDHVVVERKGRGGAVTGGRQDAPEKKITRGSSGVIHQHEPEKRISEGRGVVDQHKQIDGH
STNGVAKPKVLPAPKVNPSKAVGESTRDTREIRKDVQERQKGAKADDVERAKACQLEFGS
YCLWSIEHKEVMKDSIVKRLKDQLFVARSYYPSIAKLQGQEALTQEMKQNIQDHERVLSV
STVDADLPSFINKRMEQMERTIARSKSCTVDCKNVDRKLRQILDMTEDEAHFHMKQSAFL
YNLGAQTLPKSHHCLSMRLTLEYFKSSSLDSDDSPSGKFNSPKYRHYVILSRNVLAASVV
INSTVSSCKEPGILAFHILTDAQNFYAMKHWFARNSYKSAAIHVINYEAIILERLPKYSI
RHLYLPEEFRVLIRSTKQPTDNTRMEYLSLFSHSHFLIPEIFKYLNKVVLLDDDLVIQRD
LSFLWNIDMGDKVNGAVEFCGLKLGQMRNVLGKTAYDPKSCAWISGVNLINLDKWREHNV
TENYLMLMKKFKFKDEQSLRAAAFPLSLLSFQHLIYPLDEKLTLSGLGYDYGIDEEVARR
SVSLHYNGNMKPWLELGIPHYKKYWKRFLVRGDQFMDECNVNP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcagccgctactgccggcgccgctcaagaggcggaggggcccgcgcgtcgcg
gtgctggcgctcgtcctctgctccctgctcgtccccttcgccttcctcttcgaccgcgcc
cccactggagggtacgtgacgacggaggagcggcaccgacaggaggtcgttctgcctttg
gtcgatcacgtggtcgtggagaggaagggtcgtggtggcgctgtcactggaggtagacag
gatgcgccggagaagaagatcaccagaggtagttcaggagtcattcatcaacatgaacca
gagaagaggatctccgaaggtagaggagtcgttgatcagcataagcaaattgatggccac
tcaacaaatggtgttgctaaaccaaaagttcttccagcaccaaaagttaacccatcaaag
gctgtgggggaatcaactcgagacaccagagagatcagaaaagatgtacaagagcgacaa
aaaggtgcaaaagctgatgatgtggaaagggcgaaggcttgtcaacttgaatttgggagt
tattgtctctggtccatagagcacaaagaagtaatgaaagattctatagtgaaaaggcta
aaagatcaactctttgtagcacgctcatactatccgagcattgcaaaacttcaaggacag
gaagctctcactcaggaaatgaagcagaacatacaagaccatgagagggttcttagtgta
tcgacagttgatgctgatctaccatcctttatcaacaagaggatggagcagatggaacga
acaatagcgagatccaaatcttgcacagtggattgtaagaatgttgacaggaagcttcgc
cagatacttgatatgactgaggatgaagctcattttcatatgaagcagagtgcattcctc
tacaatcttggtgcccagacattgccgaaaagtcatcattgcctttctatgaggttgacg
ttagaatacttcaaatcatcttcgctggattcggatgattctccttctggcaagttcaat
agtccaaaatatcggcactatgttatactgtctaggaatgttcttgcggcttctgtagtg
atcaactcaactgtgagcagttgtaaggagccaggcatccttgcttttcacatcctaact
gatgctcagaacttctatgccatgaaacactggtttgccaggaattcatataaaagtgca
gctatccatgtcataaactatgaagcaattattttggagaggttgccaaagtatagtatc
agacacctgtatttgccagaggagtttcgtgttctcattaggagcactaagcagcctact
gataatacaagaatggaatacctatcgttgttcagccactctcatttccttattccagaa
attttcaagtatctaaacaaagtggttctgttggatgacgatttagtcattcaacgagat
ttgtccttcttgtggaatattgatatgggggacaaggtaaacggtgccgtcgaattttgt
ggtctgaaactgggtcaaatgagaaatgtcttgggtaaaacagcatacgatcccaagtca
tgtgcatggatttcaggggtgaatttgattaatttggataaatggagggaacataatgtt
acagaaaactatctgatgctcatgaagaagttcaaattcaaggatgagcaatctctgcga
gcagcagcatttcctctaagcttgctatccttccaacatctcatctatcctctagatgaa
aaattgaccctgtcaggacttggatatgattatggaattgatgaagaggttgctcggaga
tcagtatcattgcactacaatggtaacatgaaaccttggcttgaattaggtataccacac
tacaaaaagtactggaagaggtttcttgttcgaggagatcaatttatggatgagtgcaat
gtaaatccatga
DBGET
integrated database retrieval system
