Setaria viridis (green foxtail): 117844830
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Entry
117844830 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117844830
Enzymes [BR:
svs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
117844830
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117844830
Prokaryotic type
117844830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
117844830
NCBI-ProteinID:
XP_034581515
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Position
2:complement(45023475..45030461)
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AA seq
711 aa
AA seq
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MRGRFLLNPLPLLLTPKPPSRPLAAHFRAGAGAGAAAHPPAPSPTPRRGPVDEPDVGISR
FASSVAGFRGALKQRYSDFIVHEVARDGALVRLTSFDLPDVDERGDNAAEGDADADHTRA
LESFRLLCGEADYDALRGFLERVLEGDGDLSPIILSADADKAHRLEVHEFIKRNFKFLIT
DTVEHGDGIQKCIRVRLGSGPRGGRGRNMRGMDGSGWRDDRPFDSRGSTSWPYHLGKFLR
FHLYKENRDTQEALGVIGKMLGVQPRSFGFAGTKDKRAITTQQVTLFKVHASRLVALNSK
LAGIRVGDFSYVNEGLALGQLRGNRFAITLRNVVAESDDVIKAAVDGLSKNGFINYYGLQ
RFGSGSVPGHFVGAALLRGEWRHAVSLILGTRVHYKVHGDIDAALSGIPRYLTMERAMLQ
RLKKYPGNYLQALMAIPKTLRLMYVHSYQSYLWNHAASMRVEKYGISQVVEGDLVYRKGC
SLGEAATVDTFDNDDSNTNSPEMEISCETLPEEVIQSVKIVDSEDLLNAAYTFEDVVLPL
PGSETLFPGNEVAEIYHEIAKKDGISLVESVHGIKDFSITSMKGGYRRLLQRPIDFEWDL
MTYTDDNVPLLETNLVVLSKTNPSEANKLLSDGISSFASCDSGLDASLDTSGPTTEASSV
KTKSNGISEPLPEKLAVKLEFTLPASSYATMAIRELTKTSTSVAYQKTLNS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgctttctcctaaaccccctcccgctcctcctcacccctaaacccccctcc
cgtcccctcgccgcccacttccgcgccggcgccggcgccggcgccgcggcccatccgccc
gcaccctcgcccacgccgcgccgcgggcccgtggacgagcccgacgtcggcatctcccgc
ttcgcctcctccgtcgcgggcttccgcggcgcgctcaagcagcgctactccgacttcatc
gtccacgaggtcgcccgcgacggcgccctcgtccgcctcacctccttcgatctccccgac
gtcgacgagagaggggataacgcggcggaaggcgacgccgacgcggaccacacgcgggcg
ctggagtcgttccggctgctctgcggcgaagcggattacgacgcgttgagggggtttctg
gagagggttttggagggagatggggatttgtcgccaatcattctctcagcagatgccgat
aaggctcatcgtttggaggtgcacgagttcatcaagaggaatttcaagttcctgatcacg
gatacggttgagcacggtgatgggattcagaaatgtattagggtgcggttgggatcaggg
ccacgcggtgggagagggaggaatatgagaggcatggacggttcaggctggagagatgac
aggccgtttgatagtagaggctctacatcctggccttatcacctggggaagttcctgagg
tttcacctttataaggagaacagagacacacaagaggcactaggagttataggaaagatg
ctaggggttcagccacgatcatttggatttgcggggacaaaggataaacgtgccattaca
acccaacaggtgacacttttcaaagtacatgccagtaggttggtcgctcttaatagcaaa
ctcgcaggtatcagagttggagactttagttatgtgaatgaaggccttgctcttggtcaa
ctcagagggaaccggtttgcaattactttgaggaatgttgttgcagaatcagatgatgtg
ataaaggctgctgttgatggcctgagtaaaaatggatttatcaattactacggcttacag
cgctttggtagtggttcagtacctggtcactttgtcggtgctgctttgcttagaggagag
tggagacatgctgttagcttgattcttggtacaagggtacattataaggtccatggcgat
attgatgcagcacttagtggaatcccccgatatctcacgatggagagagctatgcttcag
cgtttgaagaagtaccctggcaactatctacaagcactaatggctatacctaaaacattg
agactgatgtatgtacatagttaccagagttacctatggaaccatgctgcaagtatgaga
gttgaaaagtatggtatttcacaagttgtagagggtgatttggtttacagaaaggggtgc
tctcttggagaagcagctacagtagatactttcgacaatgatgatagcaatactaattca
cctgaaatggaaatatcttgtgaaacacttcctgaagaagtgatccagtctgtgaagata
gttgattctgaagatttattgaacgcagcttacacgtttgaggatgttgtcctccctttg
cctggttcagaaacattgttccctgggaatgaagttgctgagatttatcatgaaatagcc
aagaaggatggcattagcctggtagagagcgtccatgggatcaaggacttctcgattacc
agcatgaaaggaggttaccgtcggctactccaacgacctattgattttgaatgggaccta
atgacttacacagatgacaatgtacctttattggaaactaatttagttgttctatccaaa
accaacccatcagaagcaaataagctgctatctgatgggatttccagtttcgcatcatgt
gattctggattggatgcttcattggacacctctggaccaaccactgaagctagctcagtg
aaaaccaaatctaatggcatctcagaaccgttacccgagaaactggctgtaaaattagaa
tttactctaccagcatcatcctatgccacaatggccatcagggagttgacaaagacttca
acttcggttgcttaccagaaaacgttgaactcctga
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