Setaria viridis (green foxtail): 117844871
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Entry
117844871 CDS
T07951
Name
(RefSeq) tubulin alpha-3 chain
KO
K07374
tubulin alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04145
Phagosome
svs04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117844871
09142 Cell motility
04814 Motor proteins
117844871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117844871
03036 Chromosome and associated proteins [BR:
svs03036
]
117844871
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svs04812
]
117844871
04147 Exosome [BR:
svs04147
]
117844871
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117844871
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117844871
Cytoskeleton proteins [BR:
svs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117844871
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117844871
Exosomal proteins of other body fluids (saliva and urine)
117844871
Exosomal proteins of colorectal cancer cells
117844871
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117844871
NCBI-ProteinID:
XP_034581581
LinkDB
All DBs
Position
2:42644030..42647390
Genome browser
AA seq
450 aa
AA seq
DB search
MREIISIHIGQAGIQVGNACWELYCLEHGIEADGTMPSDTSVGVAHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDEGDDGEDY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcatcagcatccacatcggccaggccgggatccaggtcggaaacgcctgc
tgggagctctactgcctggagcacggcatcgaggccgatggcaccatgcccagtgatacc
tcggttggcgttgcacatgatgccttcaacactttcttcagcgagactggttctggcaag
catgtgccgagggccatctttgtcgaccttgagcccactgtcattgatgaggtgcgcact
ggctcataccgccagctcttccacccagagcagctcatctccgggaaggaggatgcggct
aacaactttgcccgtggccactacaccgtcggaaaggagattgtcgatctatgcctggat
cgcgtgcgcaagctggcagacaattgcactgggctgcagggattcttggtgttcaatgct
gttggtggtggtactggctctggacttggttcactgctgctggagcgcctctcagttgat
tacggcaagaagtccaagcttgggttcaccatttatccttccccacaggtgtcaacagct
gtcgtagagccatacaacagtgtcctctctacccactccttgcttgagcacacagatgtt
gcagtcctcctggacaacgaggctatctatgacatatgccggaggtcccttgacattgaa
aggccaacctacaccaacttgaacaggctgatctcacagatcatatcttcgcttaccacc
tccctgaggtttgatggtgctatcaacgtggatgttactgagttccagaccaaccttgtt
ccatacccacgtatccatttcatgctttcatcatatgcccctgtaatctctgccgagaag
gcctaccatgagcagctctctgtgcctgaaatcaccaatgctgtctttgagccctcaagc
atgatggccaagtgtgacccaaggcatgggaagtacatggcttgctgcttgatgtaccgt
ggtgatgttgttcccaaggatgtcaatgctgcagttgcaaccatcaagaccaagagaact
gtccagtttgtggactggtgccccactgggttcaagtgtggtatcaactaccagccacca
tctgttgtccctggaggcgacctggcaaaggtccagcgtgcagtgtgcatgatcagcaac
aacactgccgtcgccgaggtgttctcacgcattgaccacaagttcgacctgatgtacgcc
aagcgcgccttcgtgcactggtacgtcggtgagggtatggaggaaggcgagttctcggag
gcccgtgaggacttggccgcgctcgagaaggactacgaggaggtcggcgcagagggcgcg
gacgacgaaggtgacgatggagaagactattga
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