Setaria viridis (green foxtail): 117844916
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Entry
117844916 CDS
T07951
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117844916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117844916
04147 Exosome [BR:
svs04147
]
117844916
04090 CD molecules [BR:
svs04090
]
117844916
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117844916
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117844916
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117844916
CD molecules [BR:
svs04090
]
Proteins
117844916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
Zeta_toxin
AAA_22
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_15
DUF87
AAA_25
AAA_30
DUF815
AAA_23
AAA_28
SRP54
Motif
Other DBs
NCBI-GeneID:
117844916
NCBI-ProteinID:
XP_034581655
LinkDB
All DBs
Position
2:complement(43331885..43337164)
Genome browser
AA seq
1259 aa
AA seq
DB search
MVKDDSPAETVEEKPAAPVLRSFASVFMHADAVDVALMVLGLAGAMGDGMSTPVMLAITS
RVFDDTGSGPDHLQQFSSKMNVNVRNTLFLAAAHWIAAFLEAYCWTRTAERQSSRMRARY
LRAVLRQDVEYFDISAGSTSEVITGVSGDALAVQDALSEKVPNFVMNVTLFVSSYAVAFA
LLWRLTMVSLPSVLLLVVPGFLYGRVQVGLARRMREQHARPGAIAEQAVSSVRTVYSFVA
ERATAARFSAALEESVRLGLRQGLAKGVAVGSGGIRIAIFAFNVWYGSRLVMYHGYKGGT
VYIVAVVIVVGGGALGSALSNIKYLAEASSAAEQIVELIRRVPKIDSESGAGEVLDSVAG
EVEFRNVEFCYPSRPKSAVLVSFSLRVPAGRSVALVGASGSGKSTVIALLERFYDPTAGE
VILDGVDIRRLRLNWLRAQMGLVSQEPALFATSIRENIRFGKEDATEEEITAAAKAANAH
SFISQLPRGYDTQVGECGIQMSGGQKQRIAIARALIKSPKILLLDEATSALDTNSEHVVQ
EALELASMGRTTIVVAHRLSTIRNADMIVVMQSGEVKELGSHHELNGNENGLYSSLVRLQ
QTRDSVDMTEGGEELEKTRSTDILRQSSSQSMSRGFTAASRSSSTRSVGDAKAYGNTENP
KLPVPSFRRLLMLNAPEMKQALMGIFSAIVSGSIQPVFAYAMGSVISIYFSTDHQEIKKE
TRTYALVSVGLAVLTFLISIGQHYNFAAMGEYLTKRIRERMLSKFLTFEIGWFDRDENSS
GSICSQLTNDANIVRSLVGDRMSLVTQTVSAVLTAYIMGLVIAWRLALVMIAVQPLDITC
FYTRHVLLKRMSKKSMQAQSECSKLAAEAVSNLRTITAFSSQNRILHLFNQAQDGPRKES
IRQSWFAGFGLGTSMSILRCTWALTFWYSGILIAGHHITAKAFFQTFLILVSTSLVIADA
GSVTADLAKGADAVASVFAVLDRKTEIDPDSPDGYKPEKLKGEVDIREVDFAYPSRPDVI
IFKRLSLSIEPGKSTAFVGQSGSGKSTIIGLIERFYDPISGVVEIDGKDIKTYNLRALRQ
HIGLVSQEPTLFAGTIRENIVYGTETASEEEIENAARSANAHDFISNLKDGYNTRCGEQG
VLLSGGQKQRIAIARAILKNPAILLLDEATSALDSQSEMVVQEALDRMLTGRTSVVVAHR
LSTIQNCDMIIVLEKGIVVEKGTHASLLGKGPAGTYFGLVNMQQGSNHTNSSVILHEKP
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggacgacagcccggcggagacggtggaggagaagccggcggcgccggttctg
cggtcgttcgcgtcagtgttcatgcacgcggatgcggtggacgtggcgctgatggtgctg
ggcctggcgggcgccatgggcgacggcatgtcaacgccggtgatgctggctatcaccagc
cgcgtcttcgacgacaccggcagcggccccgatcacctccagcagttcagctccaagatg
aacgtgaacgtgaggaataccctcttcttggctgctgcacactggatcgcggcgttccta
gaggcgtattgctggacgcggacggcggagcggcagtcgtcgcggatgcgggcacggtac
ctgcgggcggtgctccggcaggacgtggagtacttcgacatcagcgcgggctcgacgtcg
gaggtgatcaccggcgtctccggcgacgccctcgccgtgcaggacgcgctgagcgagaag
gtgcccaacttcgtgatgaacgtcaccctgttcgtgtccagctacgctgtcgcgttcgcg
ctcctgtggcggctcacgatggtgtcgctgccgtccgtgctgctgctcgtcgtccccggc
ttcctgtacggccgcgtccaggtcggcctggcgcgccgcatgcgggagcagcacgcgcgc
ccgggcgccatcgccgagcaggccgtgtcgtcggtgcgcaccgtgtactcgttcgtcgcg
gagagggccaccgcggcgcggttctccgccgcgctggaggagtcggtgcggctcgggctc
aggcaggggctcgccaagggcgtcgccgtcggcagcggcggcatccgcatcgccatcttc
gccttcaacgtctggtacggcagccgccttgtcatgtaccacggctacaagggcggcacc
gtctacatcgtcgccgtcgtcattgtagtcggaggcggagcgctagggtccgcgttgtcg
aacatcaagtacttagcggaggcgagctcggcggcagagcagatcgtggagttgatcagg
cgggtgcccaagatagactcggagagtggcgccggcgaggtgctagacagcgtcgccggc
gaggtggagttcaggaacgtggagttctgctacccgtcgcggccgaagagcgccgtcttg
gtgagcttcagcctacgcgtgccggccggacgctcggtggcgctggtgggcgccagtggg
tcggggaagtcgacggtgatcgcgctgctggagcgcttctacgacccgacggccggggag
gtgatcctcgacggcgtggacatccggcggctgcggctcaactggttgcgcgcgcagatg
ggactcgtcagccaagagccggcgctgttcgcgacgtcgatcagggagaacatacggttt
ggaaaggaggacgccacggaggaggagatcacggctgcggcgaaggcggccaacgcccac
agcttcatctcgcagttgccgcggggctacgacacgcaggtgggtgagtgtggtatccaa
atgtctggaggacagaagcaaaggattgctattgccagagcactcataaagtcacccaag
atcctcctcctcgatgaagccactagtgcattggacactaattcagagcatgttgtgcag
gaggcgcttgagttggcctccatgggccgaactactattgtagttgctcatcgtctctcc
actatccgcaacgccgatatgattgttgtcatgcagtctggtgaggtcaaggagttagga
tcccatcatgagctcaatggaaatgagaatggcctctactcatctcttgtgcgccttcag
caaaccagagattcagtggacatgaccgagggcggcgaggagcttgaaaaaactagaagt
acagatattttgcggcaatcaagcagtcaaagcatgagcaggggtttcactgcagcaagt
aggtcgagctcaacacgttcagtgggtgatgcaaaagcttatggtaacacagagaatcca
aagcttcccgtgccatccttcaggaggctacttatgcttaatgcaccagaaatgaagcag
gcacttatgggaatctttagtgcaattgtgtctggaagcatacagcctgtgtttgcctat
gccatgggtagcgtgatctcgatctacttctcaacagatcatcaagagatcaagaaggaa
acaaggacctatgcacttgtctctgtcggccttgcggtgctgacattccttatcagtatt
gggcaacattacaactttgctgccatgggggaatatctcacaaagaggatcagggaacga
atgctctctaaatttctcactttcgagatcgggtggtttgaccgcgatgagaactctagt
ggttccatatgctcacagcttaccaacgatgccaacattgtgaggtcactggtgggtgat
cgaatgtctctagtgacccagacagtttctgcagttctaacggcgtacatcatgggtcta
gtgattgcttggcgtttagctcttgtgatgattgcagtgcagcctcttgacattacatgc
ttctatactcgccatgtcttactaaagagaatgtccaagaaatcaatgcaggcacaatct
gaatgcagtaagcttgctgccgaggctgtctctaatctccgaacgataactgctttctca
tcccagaaccgcatcctgcacctctttaaccaagcacaagatggtccacgcaaggaaagc
atccgacagtcatggtttgcaggttttggcctcggcacctccatgagcattttgagatgt
acatgggcactcaccttctggtatagtggcattctcatagctgggcaccatattaccgcg
aaggcctttttccaaacctttttgattctagtaagcacaagccttgtgattgcagatgca
ggtagtgttactgcagaccttgctaagggtgctgatgcagtcgcttcggtgtttgctgtt
cttgatcggaaaacagagatagatcccgatagccccgatggatataaaccagagaagctc
aaaggcgaggtggacattagagaagttgattttgcatatccatcaaggccagatgtgatc
atcttcaaaagattatccttgagcatcgaaccaggcaagtcaacggcatttgttgggcaa
agtggttcaggcaagtcgaccattattgggcttatagagaggttctatgacccaattagc
ggggtagtagagatcgatggtaaagatattaaaacatataatcttcgagccctacgtcag
cacattgggctggtgagccaagaaccaacactatttgcaggtaccatcagagagaacatt
gtgtatggcaccgaaacagcgagcgaggaagaaattgagaatgcggcaagatctgcaaat
gcacatgacttcattagcaacctgaaggatggatataacacaaggtgtggtgagcaaggt
gttttactttcaggagggcagaagcagcgaattgctattgctcgtgcgattctaaagaat
cctgctatattgcttctggatgaagctacaagtgcattggacagtcagtctgagatggtg
gtgcaagaggcattggaccgaatgttgacaggcaggaccagcgtagtggtggcacacagg
ctgagcactattcagaactgtgacatgatcattgtgcttgagaaaggaattgttgtggag
aaaggcacacatgcatccctccttggaaaaggtcctgctggaacatactttggattggtt
aatatgcagcaaggaagcaaccacaccaacagctctgtgattctgcatgaaaaaccctag
DBGET
integrated database retrieval system
