Setaria viridis (green foxtail): 117845053
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Entry
117845053 CDS
T07951
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117845053
03036 Chromosome and associated proteins [BR:
svs03036
]
117845053
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117845053
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117845053
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117845053
microRNA pathway
RISC loading complex
117845053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
117845053
NCBI-ProteinID:
XP_034581820
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Position
2:18330387..18340209
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AA seq
886 aa
AA seq
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MPDSMATKMAGSVQVVKDDTVKRTPMARPSIGREGKPIRLLSNHFAVKLNGVDAVFYQYS
VSIKSEDDKVVDGKGIGRKVIDKLLQTYSSELDGKDFAYDGEKCLFTVGPLPQNNFEFTV
ILEETSSRAVGGSPGHGSPSQADKKRVKRSHLAKKFIVAISYAAKIPLKSVALALRGSES
EHAQDALRVLDIVLRQQQAKRGCLLVRQSFFSDDSRNLVDLTGGVSGCRGLHSSFRTTIG
GLSLNMDVSTTMIVTPGPVIDFLLTNQNVRDIRDIDWPRARKMLKNLRVKAKHNNMEFKI
IGLSDQPCSRQTFPMKVRNGSIEVQTMDITVQDYFKSKQVELMMPYLPCLDVGKPKRPNY
LPIELCHMVSLQRYTKALSSQQRANLVEKSRQKPQDRMRVVTDAVKSNRYDDDPILSSCG
IEIEKHLTRVDGRVLSAPTLVVGNSEDCIPNRGRWNYNNKRLLDPVKIERWAIVNFSARC
DMSRISRELINCGRSKGIFIERPHTLVDEDSQSRRCSPVERVERMFEKVKTSLPGPPEFL
LCVLPERKNCDIYGPWKKKNLHEMGIVTQCIAPSNKMNDQYFTNVLLKINAKLGGMNSKL
ALEHRQMIPVVTQIPTLILGMDVSHGSPGRADIPSIAAVVGSRCWPLISRYRASVRTQSP
KVEMIDSLFKPLYDGKDDGIMRELLLDFYQTSQQRKPKQIIIFRDGVSESQFSQVLNVEL
NQIIKAYQSMGQGDLPKFTVIIAQKNHHTKLFQVDSPDNVPPGTVVDSGIVHPRQYDFYM
CAQAGPIGTSRPTHYHVLLDEIGFSADNLQKLVLSLSYVYQRSTTAISVVAPICYAHLAA
AQVGQFMKFEEFADTSSGSGVNSSSAAAIPELPRLHADVCSSMFFC
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatagtatggctactaaaatggctggatctgtccaagtggttaaggatgacact
gttaaacgcacaccgatggcacggcctagcattggtcgtgaaggaaagccgattaggttg
ctgtcaaaccactttgctgtgaagcttaatggagtagatgctgttttctaccaatacagt
gtttccatcaaatctgaggatgataaggtggttgatggtaagggtattggccgaaaggtc
attgataaactgttgcaaacatacagttctgaacttgatgggaaggattttgcatatgat
ggagagaaatgtttatttactgtgggaccacttccacagaataactttgaattcactgtt
atcttggaagaaacatcttcaagggctgttggtggaagtccaggacatggaagccctagt
caagctgacaaaaagcgagtaaagcgatcacatcttgcaaaaaaattcattgtggccata
agttatgcagcaaagattcctctaaagtcagttgctttggcacttcgaggaagtgagtca
gaacatgctcaggatgctctgagagtccttgacattgttttaaggcaacagcaggctaag
cgaggttgtctacttgttaggcagtcatttttcagtgatgacagtcgaaaccttgttgat
ttaactggtggagttagtggctgtcgtggactccactctagtttccggactacaattggt
ggtctttcattgaacatggatgtttcaaccaccatgattgtgactcctggaccagttatt
gattttctcctcacaaatcaaaatgtcagagatatcagggatattgactggcccagggcc
aggaaaatgcttaaaaacctgagagttaaagctaagcacaacaacatggagttcaagatc
attggccttagcgatcaaccatgctccagacagacattcccaatgaaagttagaaatgga
agcattgaagttcaaactatggatattactgttcaggattattttaagtccaagcaggtt
gaattaatgatgccttatctgccatgccttgatgttggaaaaccaaaacgtcctaattat
ctcccaattgagttatgccacatggtatcactccaacgttatacaaaagcactatcttct
caacaaagagcaaatttggttgaaaagtcacgacagaagcctcaagatagaatgcgagtt
gttacagatgctgtaaaaagtaataggtatgatgatgatccaatcttatcttcttgtggt
attgaaatcgagaaacatcttactcgtgttgatggtcgtgttctctctgcaccaacgctg
gttgtggggaacagtgaagactgcatcccgaacaggggcaggtggaactacaataacaag
aggctattggatcctgtcaagattgagcgttgggctatcgttaatttttctgctcgttgt
gacatgagcagaatctcaagagagttgataaactgtggacgaagcaaaggcatttttatt
gaacgtcctcacacattggtggatgaggacagtcaatccaggagatgttcacctgttgaa
agggttgagaggatgttcgaaaaagtcaaaacaagccttcctggccctccggagtttctg
ttgtgtgttttaccagagaggaagaattgtgatatttatgggccatggaagaagaaaaat
cttcatgaaatgggtattgtcactcaatgcattgctcccagtaataagatgaatgatcag
tatttcaccaatgttcttctaaaaattaatgctaagctcggtggaatgaattctaaattg
gcattggaacatcgccagatgataccagttgtgactcagataccgacattaattcttgga
atggatgtttcacatggttctccaggtcgagcagatataccatcaattgccgcggttgtt
gggtctagatgctggccactgatatcacggtacagagcatctgtccggacccaatctcca
aaggtagagatgatcgattctctatttaagccgctgtatgatgggaaggatgatggcata
atgagggaacttctactggacttctaccagaccagtcaacaaagaaagcctaagcagata
attatcttcagggatggtgtgagcgagtctcaatttagccaagtactgaatgttgagctt
aatcaaatcataaaggcttatcagagtatgggacagggggaccttccgaagttcacagtg
atcattgctcaaaagaatcaccacacaaaactcttccaagttgattcgccagacaacgtt
ccacctgggactgtcgtagactctggtattgttcatccaaggcagtatgatttttacatg
tgtgctcaagctggaccaattggtacctcaagacccacccactaccatgtgttgctcgat
gagattggcttctcagcagataatctccagaagctagttctttcactttcatatgtgtat
cagaggagcaccactgcaatttctgttgtggcacctatctgttacgcccacctagcagca
gctcaggtgggccagttcatgaaattcgaagagttcgctgatacctcatcaggcagtggt
gtcaattcgtcatcagcagcagcaatcccagaattgccgcggcttcatgctgatgtctgc
agttccatgttcttctgttga
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