Setaria viridis (green foxtail): 117845220
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Entry
117845220 CDS
T07951
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117845220
03036 Chromosome and associated proteins [BR:
svs03036
]
117845220
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117845220
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Helicases
117845220
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117845220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-GeneID:
117845220
NCBI-ProteinID:
XP_034582072
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All DBs
Position
2:36355026..36359525
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AA seq
708 aa
AA seq
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MSPALAAAAEPMAVDDSASKKAKRKQLKAAAAAAEAEAAEAASAKKKEKKEKKRKAKEPS
PPAPSSDEEEKSSTSSEETAPAAKKAKKEKTKKNVEASPSASEDDGEITASSDEDPADPN
ALTNFRISEPLRQRLKSKGIKALFPIQATTFDLVLDGSDLVGRARTGQGKTLAFVLPILE
SLVNGTHKASRKTDYGRLPTVLVLLPTRELANQVHADFEFYGSTYGLSACCVYGGSPYRP
QEMALRKGVDIVVGTPGRVKDFVVKGTLNLKSLKFRVLDEADEMLNMGFVDDVELILGKV
EDVTRVQTLLFSATLPDWVNKLSMRFLKGDRKTVDLVGNEKLKASASVKHLALPCNKAAR
AQVIPDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRGGK
FQVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKH
SVSRLERESGVKFEHISAPQPTDVAQSAGTEAADAISSVSDSVIPVFRQQAEQLLSSSSL
SAADLLAKALAKAVGYTDIKKRSLLSSMEDYTTLHLQTGRPMWSPGFAFTILKRFMPEEK
LADVKGATLTVDGTGVVFDVPAADVEDYIQAAESAAQVTIDEVKQLPPLQEREQSRGNSG
GGRFGRGGGGSRFGGGGGSRFGGGGGRGGGGSRFGGRGGGGNRFNRRN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcgctcgccgccgccgcggagcccatggccgtcgacgattccgcctccaag
aaggccaagcggaagcagctcaaggccgccgccgccgcggcggaggctgaggcggcggag
gccgcttcggcgaagaagaaggagaagaaggagaagaagcggaaggcgaaggagccgtcc
ccgccggccccgtcctcggacgaggaagagaagagcagcaccagctcggaggagacggcc
cccgctgcgaagaaggcgaagaaggagaagacgaagaaaaatgtcgaggcctcaccttcg
gcctcggaggacgacggcgagatcacggccagcagcgacgaggaccccgcggacccgaac
gcgctcaccaacttccggatatcggagccgctgaggcagaggctcaagtccaaggggatc
aaggcgctgttccccatccaggccactaccttcgacctcgtcctcgacggcagcgacttg
gtcggccgcgcgcgcactggccagggcaaaactttggcttttgtactgcccatactggag
tcgttggttaatgggacacacaaggcatcccggaaaactgactatggcaggcttccaact
gttttggttctgctaccaaccagagagctggccaatcaggtgcatgcggactttgagttt
tatggttccacatatgggctttctgcgtgttgtgtgtatgggggttctccttatcgtcct
caagaaatggcattgagaaagggggtggacattgttgttgggactcctggtcgtgtcaag
gatttcgttgtaaaaggaactctaaatttgaagtctttgaaattccgtgtccttgatgaa
gctgatgagatgcttaatatgggcttcgttgatgacgtagagctcattcttggcaaggtt
gaagatgttactagagtacaaacactactgttcagtgctactctgcctgattgggttaat
aagctctccatgaggttcctgaaaggtgacaggaagacagttgatcttgtcggcaatgag
aaactgaaggctagtgcatctgtcaagcatcttgctcttccttgcaacaaggcagcaagg
gcacaagttattccggacattatccgatgctatagccatggaggccgaaccattatcttc
accgagacgaaggactctgcatcagagctttctggtttgatccctggatcccgtgccttg
catggagatgttgtgcaagctcagcgtgaagttatccttgctggattccggggtgggaaa
ttccaagttttggttgctacaaatgtggcagctcgtggtctggacattaatgatgtgcaa
cttatcattcagtgtgaacctccacgtgatgttgaagcttacatacaccggtcagggcgg
acagggagagcaggtaacactggtgttgctgtcatgctctatgagcccagatacaagcac
agtgtgagcaggttagaaagggagtcaggggttaagtttgaacatatctctgcgccacag
cctactgatgtggcacaatcagctggcaccgaagctgcagatgctatttcgagtgtgtcg
gacagtgttatccctgtcttccggcagcaagcagagcaactgttaagctcttctagtctg
tctgcagctgacttactagccaaagcactggcaaaggcagttggatacactgacataaag
aaaagatcattgctctcttctatggaggattacactacattacatcttcaaactggcagg
cctatgtggtcaccggggtttgcttttactatattgaaaaggtttatgccagaagagaag
cttgcagatgtaaagggtgccaccctaacagttgatggaacaggggttgtatttgatgtt
cctgcagcagacgttgaagactacattcaagctgcggagagtgctgcccaggtgacaatt
gatgaagttaagcagctgccacccttgcaagagagagagcagtcaagaggcaactctggc
ggtggaagatttggccgtggtggaggtggcagcaggttcggtggtggaggcggcagcagg
ttcggtggtggaggcggcagaggtggaggtggcagcaggtttggtggcaggggaggcggt
gggaataggtttaacaggaggaattag
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