Setaria viridis (green foxtail): 117845303
Help
Entry
117845303 CDS
T07951
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117845303
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117845303
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117845303
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117845303
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117845303
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117845303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
RA_2
Ubiquitin_2
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
117845303
NCBI-ProteinID:
XP_034582186
LinkDB
All DBs
Position
2:complement(3651864..3664175)
Genome browser
AA seq
1120 aa
AA seq
DB search
MTTSPPPPPPAEQQQQQQEEEEVLVPHQELPNGTQPMEVVPAEPAATVENQQIEDPPISR
FTWTIENLSRVSTKKLYSEVFVVGGYKWRILIFPRGNNVEFLSMYLDVADSGVLPYGWTR
YAQFSLSVVNQIHNKFTIRKETQHQFSARESDWGFTSFMLLGELYNPSRGYLVNDTCIVE
AEVAVCKVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND
MPSGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDK
MKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQDVYASFDKYVEV
ERLEGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQ
LDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERV
TKEDAKKALEEQYGGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEK
DIAEHLRIRLEKDREEKERRKKEKAEAHLYTIIKVARDDDLKAQIGKDIYFDLVDHDKVP
SFRIQKQMTFAQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLSPQDEAHTVGQLK
ELVNKAHNAELKLFLEVELGLDLKPLPLPEKTRDDIFLFFKLYDPEKEELQYVGRLFVKA
SGRPQDILPKLRMLAGFSQDDDIELFEEIKFDPNVMCEYIDNRLLFRSCQLEDGDIICFQ
KSLKPDSADRYRFPDVPSFLVYIRNRQVVHFRSLEKPKEDDFCLEMSKIFTYDEVVEKVA
QKLGVDDPSKIRLTSHNCYSQQPKPQPIKYRGVERLLDMLIHYNQTSDILYYEVLDIPLP
ELQALKTLKVTYHHATKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPNAELRLLEVFY
HKIYKVFAPNEKIENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNF
GEPFFMVIREDETLSSIKERIQKKLKVPDEDFSKWKFAYISLGRPDYFEDSDIVATKFQR
NMYGAWEQYLGLEHPDTAPRKAHTVNQNRHSFERPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctcgccgccgcccccgccgcccgccgagcagcagcagcaacagcaggaggaa
gaggaggtgctcgtgccgcaccaggagctgccgaatggaacgcagccaatggaagttgtg
cctgctgagccagctgctactgtggaaaaccaacagatagaggatccaccaatctcaaga
tttacttggactattgagaatctatcaagagttagcacaaagaagctctactccgaagtt
tttgttgtcggaggctacaagtggcgaattttgattttccctagaggaaataatgttgaa
ttcttgtctatgtatttggatgtggccgattctggagtcttgccatatggatggactaga
tatgcgcagttcagcctctctgtggtcaatcaaattcacaacaagtttacaataagaaaa
gaaacacaacatcagttctctgctcgagaaagtgattggggtttcacttcatttatgctg
ttgggtgaactctacaaccccagtagaggttatcttgtaaatgatacttgtatagtggaa
gctgaagttgctgtgtgtaaagttgttgactattggagttatgactctaaaaaggaaact
ggttatgttggtctgaaaaatcaaggtgctacttgctacatgaattctcttcttcagacg
ctgtaccacatcccgtatttcagaaaggctgtttatcacatgcccaccactgagaatgat
atgccctcaggaagcattccgttagctctacagtcactcttttataagttgcagtataat
gatagcagtgtctctacaaaggagctcacaaaatcattcgggtgggacatgcatgattca
tttatgcaacatgatgttcaagagttaaatagagttctttccgagaagttggaagataag
atgaagggaactgttgtggagggcactatacaacaattgtttgaggggcaccatatgaat
tacatcgagtgtatcaatgtggatttcaaatcaacaagaaaagaatccttctacgatctc
cagcttgatgtcaaaggatgtcaggatgtctatgcttcattcgacaagtacgttgaggtg
gagcgtctggaaggtgacaacaagtatcatgccgaacagcatggccttcaggatgcaaag
aaaggagttcttttcatcgacttcccccctgttttgcaacttcagctaaaacgttttgaa
tatgatttcatgcgggacacgatggtgaagattaacgatcgctatgaattcccacttcaa
ttggatcttgatagagatgacggaaaatatttatctcctgatgctgacaggaatgtgcgg
aacctttacacccttcacagtgttcttgtccatagcggtggtgttcatggtggacattat
tatgctttcatacgacctaccctttctgaccagtggttcaagtttgatgatgagcgtgta
acaaaagaagatgcaaagaaggcactggaagagcaatatggtggtgaagaggagctacct
cagacaaatcctggattaaacaacactcctttcaaatttactaaatattcaaatgcatat
atgcttgtgtacatccgtgaaagtgacaaggacaaaattatttgtaatgtggatgagaaa
gacatagcagagcatcttcggattagattggaaaaagaccgtgaagagaaggagcggcgg
aaaaaggagaaagctgaggcacacctctataccatcatcaaggtcgcgagggatgatgac
ttaaaagctcagatagggaaagacatatattttgatcttgttgatcatgataaagtccca
agcttccgcatccaaaagcagatgacctttgctcaattcaaggaggaggttgcgaaggag
tttggtattcctacacagtttcaacgattttggctgtgggccaagcggcaaaaccatact
tacagacccaaccgaccattgtctcctcaagacgaagcacacactgttgggcagttaaag
gaactggtgaacaaggcccacaatgctgaactgaaattgttcttggaagttgaacttgga
ctggaccttaagcctcttcctcttccagagaagaccagagatgatatatttcttttcttc
aaactctatgatcctgaaaaggaagagctgcagtatgttggtaggctatttgtaaaggct
tcaggaagaccacaggacattctgccgaagttaaggatgttggcaggtttttcacaagac
gatgatattgaactttttgaggaaattaagttcgatcccaatgtgatgtgtgaatacatt
gataacaggcttctgtttcgatcttgccagcttgaagacggcgacataatttgttttcaa
aaatctttaaagccagatagtgctgaccgatatagattccctgacgtcccgtcctttttg
gtgtatatacgtaaccgacaggtggtccactttcgttcactggagaagcccaaggaggat
gatttttgtctcgagatgtcaaagattttcacatatgatgaggttgtggaaaaagtggct
caaaaacttggagtggatgatccatcaaaaattcggcttacatcgcataattgttattcg
caacaacctaagcctcaaccaataaagtacagaggcgttgaacgtctactggacatgctg
attcactataaccagacttctgatattttgtactatgaggtattggacattccacttcca
gaattacaagcgctgaagacattaaaagttacttatcatcatgccacaaaagatgaggtg
tcagttcacagtataagattgccaaaaaacagcactgttggtgatgtgctaaatgatatt
aaatcgaaggttgagttgtctcatcccaatgctgagctaagattacttgaggtcttttat
cacaagatatacaaggttttcgcaccaaatgaaaagatagaaaacattaacgatcagtac
tggacattgcgtgctgaggaggttccagaggaggagaaaaaccttggtccctttgaccgc
ttaattcatgtatatcattttacaaaagatactcaaaaccaaacgcaagttcagaacttc
ggagaacctttttttatggttattcgtgaggatgagaccctatcttctatcaaggaacgt
atacagaaaaagcttaaagttccagatgaggatttctcaaagtggaaatttgcatacatt
tcacttggccgtccagactactttgaagattcagatattgtggctacaaagttccagaga
aacatgtatggagcttgggagcagtatcttggtctggaacatccagacacagctcctagg
aaggcacacacggttaatcagaaccggcattcatttgagagacctgtaaaaatttataac
tag
DBGET
integrated database retrieval system
