Setaria viridis (green foxtail): 117845313
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Entry
117845313 CDS
T07951
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117845313
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117845313
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
117845313
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117845313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
117845313
NCBI-ProteinID:
XP_034582201
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Position
2:33852974..33857615
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AA seq
701 aa
AA seq
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MLRGRRRCRGAVLLLLLASVLAPLVLYGGSPVSVAPLPDSTVASAAFDREDAPNLVWPQI
AASLAKDLTIERLGEHKNRVLSATDHWQAVEGASSRSRVPGKPDASVLREESETRNADEE
DAPVIEGNERARLGQGGVIKQVVGSEASADGFGEPRDGKEAVLQNGEEVGIKLLHPIDAE
HKEGSDEAGENIVSGMHTVGNLNSSSSETRDATTSRKHQTRVSNNNSARSTANRSAGRST
TSPDATIHIIKDQLTRAKTYLGFVASRGNHGFARELRARMRDIQRALGDATSDRQLPQNV
HSKIRAMEQTLVKVRKIHDSCSGAVNRLRTVLHSTEQQLESNKRQANYLAQVAAKSLPKG
LHCLTLRLTNEYYFTNPKNKDFPYAEKLEDPKLYHYALFSDNVLAAAVVVNSTLVHAKKP
ENHVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFTWLNSTYSPVLKQLESRFMID
YYFRNGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVQRDLTALWL
VDLKGKVNGAVETCRETFHRFDKYLNFSNPLIAKNFDPHACGWAYGMNMFDLSEWRKQNI
TEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNEKDIRRAA
VIHYNGNLKPWLEIGLPKYRKYWSRHVDFDQVFLRECNINP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggggcggcggcggtgccggggcgcggtgctgctgctgctcctcgcgtcggtg
ctcgcgcccctcgtgctctacgggggctcccccgtctcggtcgcgcccctcccggactcc
accgtggcgagcgccgcgttcgatcgggaggacgcgcccaatctggtgtggccgcagata
gctgcgtccctggccaaagatttgaccatcgagaggcttggggagcacaagaaccgtgtg
ctatcagcaacagatcactggcaggcagttgagggagcgagtagtaggagccgtgtgccc
ggaaagcctgatgcgagcgtactgagggaggagtctgagacacggaatgcggatgaggaa
gatgccccagttattgaggggaatgagagggcacggttgggccagggtggtgtgatcaag
caggttgttggaagtgaggcaagtgcagatggatttggtgagcccagggatggcaaggaa
gctgtactgcagaatggagaagaggttgggataaagttgctgcatccaattgatgcagag
cacaaggagggatcggatgaagcaggggagaacatcgtttctggaatgcacactgtagga
aacctgaattcatcttctagtgagactagagatgctactacctccagaaagcatcaaaca
agggtgagcaacaataattctgctcgtagcacagcaaacagaagtgctggtcggtccaca
acatcaccagatgcaacaattcacatcatcaaggaccagttgacaagagcaaagacatat
cttggatttgttgcatctagaggcaatcatggatttgcaagggagctccgtgcacggatg
agggatatacaacgagcactaggtgatgcgactagcgaccggcagctacctcaaaatgtc
cacagcaaaattagagcaatggagcagacactggtgaaggtcaggaaaattcatgatagc
tgctcaggtgctgtaaacaggctccgtacagtccttcactcaacagagcagcaactcgaa
tcaaacaaaagacaagccaactatttagcgcaagtagcagctaaatcactacccaagggt
ctccattgccttacactgaggcttacaaatgagtattatttcaccaacccaaagaataag
gattttccatatgcggaaaagctggaagaccccaaactctatcactatgccttgttttct
gacaatgtattggctgctgcagtggttgttaactcaacacttgttcatgctaagaaacca
gaaaaccatgttttccacattgtgacagataggcttaactacgctgcaatgaaaatgtgg
ttcttggctaatccattgggtaaagctgctattcaggttcagaacattgaagagtttaca
tggttaaattcaacctacagtccagtcctgaaacagctggaatcccggtttatgattgat
tactacttcagaaatgggcatgctaggcctgatgaaaatcctaagtttcggaatcccaaa
tacttatcaattctcaatcatctgaggttctatcttcctgagattttcccaaagcttaac
aaggtgttatttctagacgatgatactgtagtgcaacgggacttaactgcactttggttg
gtagatctcaaaggcaaggttaatggtgctgttgagacttgtagggagacattccatagg
tttgataagtacctcaacttctcaaatcctcttattgccaagaattttgatccacatgca
tgcggttgggcatatggcatgaacatgtttgatttgtccgagtggagaaagcaaaacatc
actgaggtctaccatacctggcaaaagctgaatgaaaacagactattgtggaagctaggc
acactccctgctggtcttgtaacattctggaaccgtacgttccctcttgatcgttcctgg
catcagttggggcttgggtacaacccaaatgtcaacgaaaaggatatcaggcgggcggct
gtcatccactacaatggaaatctgaaaccctggcttgagattggattgcccaaataccgc
aagtactggtcgagacatgtcgatttcgatcaagtgtttctacgggagtgcaatataaat
ccctga
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