Setaria viridis (green foxtail): 117845337
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Entry
117845337 CDS
T07951
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117845337
03036 Chromosome and associated proteins [BR:
svs03036
]
117845337
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117845337
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117845337
SLIK complex
117845337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
117845337
NCBI-ProteinID:
XP_034582235
LinkDB
All DBs
Position
2:complement(46074360..46090225)
Genome browser
AA seq
1726 aa
AA seq
DB search
MAFFSNSGSRADSGGYNLNEKADDEGAYESVRDGDVDSNSRQWNLNEKAEDAYHSEPEQC
EAGQPSLYSSDNTFGQHARRGGGPWGTDFLKDSRSNQTSKEVPSNRGMDAASSHDDMDAS
GEDDELNRANGEVPAEEMLSDDYYEQDGEEQIESLHRGGMKQSSCSTSGGATKSASRKKK
KTTKYNAYADDDDDDEYNDDNADDDGADEDDPDDVDFEPDSETDKAADKDKFMDSENSDG
EDDDELELSEDEDDDFAENRRQPKRLKVVATKTSKGRKLPMQAQRRRGMSHTDEEYSSGK
ESDVPSDTDFDHRSKKPDRVHQKPVARSEVAPINSHNELRTSGRRRTVKKISYAESEESD
DSEEKSTKQQKEEPEEEDGETIERVLWHQPKGVAEEAMRNDQSAQPTVSSLPSDFNQQWD
ELEFYIKWKGQSYLHCQWKTLSELQSVSGYKKVLNYTKRVAEEQRYKRALSREEVEVHDV
GKEMELDLIKQYSQVERIFADRVSKADGDDLVPEYLVKWQGLPYAESTWEKDTDIEFAQD
AIDEYKAREAATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVNGW
RNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLSTLSNWAKEFRKWLPNM
NVVIYVGNRASREMCQQYEFFSDKKGGRHVKFHTLITTYEVILKDKAVLSKIKWNYLMVD
EAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKDSFVEK
YKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE
RNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDRNKVERIVMSSG
KLVLLDKLLVRLRETNHRVLIFSQMVKMLDILAEYLSLRGFQFQRLDGSTRADLRHQAME
HFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQETVN
IYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKESKKGGSMFDKNELSAILR
FGAEELFKEDKTDEETKRNLESLDIDEILERAEKVETKGGEGEEGNELLSAFKVANFSSG
EDDATFWSRLIQPDPADMVQETLAPRAARSRKSYVEDPQLDKNNNNRKRRAVEAQEKPRR
RSGRIVETVVSLPLVDGAVAQVREWSFGNIPKKDASRFVRAVKKFGNATQIDLIVDDVGG
VLAKAPHEAQIELFDLLIDGCQEAVKENTDIKGTVLDFFGVAVKPYELLARVEELQFLAK
RIARYKDPIKQYRIQLPYKKPQWSASCGWTETDDARLMVGIHWYGYGNWEKIRLDPKLGL
TTKIAPATLGERETFLPRAPNLDNRASALLQKEYAKFSGKSSKAKAGARQTVNNDNSGGT
RSMRGRQKDAQEKDDNKLNKDEIQKRKIVEAEAREEGEISESEAETKYRLDKEEKWLEWC
SEVLDEEQETLKRLDRLQNTSLNLPKEKVLSRIRKYLQIIGDKIVEVVRQHSESYRQSRK
SSRSSRMTMRLWNYVATFSNMSGEQLHDLYLKLSQDVEGGVGPSHGGNFTSNPPSKGGTS
NQLHPSRNQRPTRSLQYTSESFHNNENSGSSEAWKRRRRADPDNQFDTQSLYQPPPMMTN
GNRLQEPGSSAGILGWGPVEMRRYGNERPKRGVHPSHFPAGHGPLL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcagcaactctggaagcagggctgattcgggagggtacaacttaaatgag
aaggctgatgatgagggcgcctatgagtcagtcagggatggggatgttgactcaaactcc
aggcagtggaacttaaatgagaaagcagaggatgcctaccacagcgaaccagagcagtgt
gaagctggccagccaagtctgtactcttctgacaacacattcggccagcatgcccggaga
ggtggtggtccatggggtacagattttctcaaggattccaggtctaatcagacatctaaa
gaagttccgtcgaataggggaatggatgctgctagctcgcatgatgacatggatgctagt
ggagaggatgatgaactgaacagagcaaatggggaggtgcctgctgaggaaatgctttct
gatgactattacgagcaggacggagaggagcagattgaatcgttgcatcgtggcgggatg
aagcagtcaagctgctccacttctggtggagcaacaaagtctgcttcacggaaaaagaag
aagactacaaagtacaatgcttatgctgacgatgatgatgacgatgagtataatgatgat
aatgctgatgacgatggcgcagatgaagatgatcctgatgatgtggattttgagccagac
agtgaaacggacaaggctgctgataaggataagtttatggatagtgagaattctgatggt
gaagatgatgatgagcttgagctctcagaggatgaagatgatgattttgctgagaatcgg
aggcaacctaaacgactcaaggttgtagcaactaaaacttccaagggaagaaagttgccc
atgcaggctcaacgaaggcgggggatgtctcacactgatgaagaatattcctcaggaaaa
gaatcagatgttcccagcgatactgattttgatcacagatcaaaaaaacctgacagggtg
catcagaaacctgtggcccgcagtgaggttgctccgatcaattctcataatgagcttcga
acttctggaaggaggaggacagtgaaaaagatctcatatgctgaaagtgaagaaagtgac
gatagtgaggagaagtcaactaaacaacaaaaggaggaaccagaagaagaagatggagaa
acaattgaaagagttctttggcatcaacccaagggtgttgcagaagaggcaatgaggaat
gaccaatcagctcaacctactgtttccagcttaccatcagacttcaatcagcagtgggat
gaactagaattctacataaaatggaaagggcagtcttacctgcactgccaatggaagaca
ttatcagagctccaaagtgttagtggatataagaaggtattaaattacaccaaaagagtt
gctgaggaacagaggtataagagggcactgtcacgcgaagaggttgaggtgcatgacgtg
ggcaaggaaatggagctggatcttattaagcaatatagtcaggttgaacggatatttgct
gatagggtcagtaaagctgatggagatgatctggttccggaatatttagtcaaatggcaa
ggacttccttatgcagaatctacctgggaaaaagatactgatattgaatttgctcaagat
gcaattgatgaatataaggcccgtgaagctgccacagctatacttgggaaaactgttgat
ttccaaaggaagaaaagcaaagctagtttgaggaggcttgatgaccaaccagaatggcta
aaaggtggtaaacttcgtgattatcagcttgaaggactaaactttctcgtcaatgggtgg
agaaacgacactaatgttatacttgctgatgaaatgggtctgggaaaaactatccaatcc
gtttccatgcttggcttccttcataatgctcaagaaattaatggaccatttcttgtagtt
gtgccactgtcaacattgtcgaattgggcaaaggaatttcggaagtggctgcccaacatg
aacgttgtgatttatgttggaaaccgtgccagcagagagatgtgccagcagtacgaattt
ttttcagacaagaagggtggacggcatgtaaaattccacacgttgataactacgtatgag
gtgattctgaaggacaaagctgttctttccaagatcaaatggaactatcttatggttgat
gaagcccaccggttgaaaaattgtgaagcatcactgtatacgacacttttggaattcagt
actaagaataagctgcttatcactggaacacccttgcagaacagtgttgaagagctttgg
gcgttacttcatttccttgatccagtcaaattcaacagcaaggatagttttgttgagaaa
tacaaaaatttgagttccttcaatgaaactgagcttgcgaatctgcacaaggaattgagg
cctcatattctaaggcgagttataaaggatgttgagaagtctttacctcctaaaattgag
cggattctacgcgtcgagatgtcaccccttcagaaacagtactacaagtggattttggag
cggaattttcagaatctgaataaaggagtccggggcaatcaggtctcacttttgaatatt
gttgttgaattgaagaaatgctgcaaccatccattcttgttcgaaagtgctgatcatggt
tatggtggagatagcattggtgatcgaaataaagttgaacgcattgttatgagtagcggg
aaacttgttttgttggacaaattattggtgagattgcgggagactaaccatcgcgtgctt
atattctcacagatggttaagatgttggacatccttgcggaatacctctctcttcgggga
ttccagtttcagaggcttgatggtagtacaagagcagaccttcgtcaccaagccatggaa
catttcaatgctcctggaagtgatgatttctgttttcttttatccacacgtgccggaggt
cttggtattaatcttgcaacagcagatacagtgataatttttgactcagattggaatcct
caaaatgatctgcaggcaatgagtagggcacataggattggccaacaagagactgttaac
atctaccgcttcgtcacgtgcaaaagcgtcgaagaggatatattggaacgcgcaaagaaa
aagatggttcttgatcacttggttattcagaaactaaatgctgaaggcaggcttgagaag
aaagaatccaaaaagggtggctccatgttcgacaagaatgaactttcagctatattgagg
tttggggcagaggagttgttcaaagaagacaagacagatgaagaaaccaagagaaacctt
gaaagtttggacattgatgaaattcttgagagagctgagaaagtcgaaacaaagggtggt
gaaggggaggaaggaaatgagcttcttagcgctttcaaggttgctaacttttccagtggc
gaagatgatgccacattctggagtagactaatacagccagatcctgcagatatggttcag
gaaaccttggcacctcgtgctgcacgaagtagaaagagctatgttgaagatccccaactc
gacaaaaataataataacaggaaaaggcgggcagttgaggcacaagaaaagccgaggagg
cgttctggcagaatagtggaaacagttgtctcgttaccattggttgatggggcagttgct
caagtacgagagtggtcgtttggcaatattccaaagaaggacgcttcccgttttgtacga
gcggtcaaaaaatttgggaatgcaacccagattgatttaattgtggatgatgttggtggc
gtcctagcaaaggcaccgcatgaagcacaaatagagctgtttgatttgctgattgatggt
tgtcaggaagcagttaaagagaacacagatatcaagggcacagttttggatttttttggt
gtagcagtgaagccctatgaattgctggctcgtgttgaagagcttcagttcttggcaaag
cgaattgcacgttacaaagatccaatcaagcaatatcggatccagttaccttacaagaag
cctcagtggtcagcaagctgtggatggactgaaactgatgatgctagattgatggttgga
attcattggtatggctacgggaattgggagaaaatacggttggatccaaagcttggcctg
acaacaaaaattgcgccagcaacacttggtgaaagagagacatttttaccacgcgctcca
aacttggataatcgtgctagtgctctcctccaaaaggaatatgccaagtttagtggtaag
agctcaaaagccaaagcaggtgcccgtcagacagtcaataatgacaacagtggtggaact
agatcaatgagaggccggcaaaaggatgcccaagaaaaggatgacaataagttgaataaa
gatgaaattcagaagcgcaagatagtggaagctgaagcaagagaagaaggtgaaatttct
gaatcagaggctgagaccaaatatcgtctggacaaggaggaaaagtggcttgaatggtgc
tctgaagttttagatgaggagcaggaaactttgaagcgcctggataggctacagaataca
agtttaaacctcccaaaggaaaaggttctttcgagaattcgtaagtacctccagataatt
ggggacaaaattgtggaggttgtccggcaacacagtgagtcatacaggcaatcccgtaag
tctagtcgctcctcccgcatgaccatgaggttatggaattatgttgcaaccttttcaaat
atgtccggggagcagttgcatgatctctatttgaaacttagtcaagatgtggaaggtgga
gttggcccatcccatggtggcaatttcacatcgaatcctccaagtaagggaggtacctca
aatcagcttcatccttcgagaaaccaaaggccaactaggtctctccagtacacttctgag
tctttccataataatgagaactctggaagttccgaagcctggaagcggcggcggagggct
gacccagataaccaatttgacactcagtctctgtatcaacctcctccaatgatgacaaat
ggaaataggttgcaggaacctggtagttctgctggtattcttggctggggtccagttgaa
atgagacggtatggtaatgaaaggccaaaacgtggtgttcatcctagtcattttcctgct
gggcatggacctttgctgtag
DBGET
integrated database retrieval system
