Setaria viridis (green foxtail): 117845414
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Entry
117845414 CDS
T07951
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117845414
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117845414
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117845414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
Prok-RING_1
zf_RING_Vps8_fungal
zinc_ribbon_16
Prok-RING_4
PHD_NSD
PHD
zf-C3H2C3
zf_RING_Vps8
RINGv
Motif
Other DBs
NCBI-GeneID:
117845414
NCBI-ProteinID:
XP_034582343
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All DBs
Position
2:37146184..37150147
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AA seq
323 aa
AA seq
DB search
MDDSKGSGGGGDKPSAEPNPSPNPPPPAAAAAGAGDDGAAAAAAAAAAEAARRPFTALSQ
EEADLALARVLQEQERAYMLLRMNGGGGEGSDYGSSVAGSYEYDEEAEEDYEEELEHHLR
VHHHEHPAGDVDGEGEGAEGSEGAEGSDYEEEFEEDEEGEPEVDPADFEDDEAYARALQD
AEEREVAARLMALAGLSDWRAVDVEHEEDHVNDPQEAWQEVDPDEYSYEELVALGEVVGT
ESRGLSADTLASLPSVKYKAQNVQDGNTEQCVICRVEFEDGESLIALPCKHSYHPECINQ
WLQINKVCPMCSAEVSTSGNKEA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcgaaggggagcggcggcgggggcgataagcccagcgccgagcccaaccct
agcccgaatccgcccccacctgccgcggcggctgccggggccggggacgacggtgccgcc
gcagccgcggccgcggctgcggccgaggcggcgaggcggcctttcacggccctcagccag
gaggaggccgacctcgccctcgcccgcgtcctgcaggagcaggagcgggcgtacatgttg
cttcggatgaacggcggcggcggcgagggcagcgactacgggagctccgtggccgggagc
tacgagtacgacgaggaggccgaggaggactacgaggaggagctggagcaccacctccgc
gtccaccaccacgagcaccccgcgggcgatgttgatggcgagggcgagggcgccgagggc
tccgagggtgccgaggggagcgactacgaggaggagttcgaggaggatgaggaaggggag
ccagaggtagatcccgcggactttgaggacgacgaggcatacgcccgtgcgctgcaggat
gctgaggagcgtgaggtcgctgcgcggcttatggctctcgctggtctcagcgattggcga
gcagtggatgtggagcatgaggaggatcatgtgaatgatccacaggaggcatggcaggag
gttgatccagatgaatactcttatgaggagctagttgcattgggcgaagtagttggtaca
gaaagcagaggtctctctgctgatacacttgcttctttaccttcagtgaagtacaaggca
caaaatgttcaggatggcaacactgagcaatgtgtaatttgccgtgtggaatttgaggat
ggtgaatctttgattgcacttccctgcaagcactcataccatcctgaatgcataaaccag
tggctgcaaataaataaggtatgccctatgtgcagcgcagaagtttcaacctcaggcaac
aaggaggcgtaa
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integrated database retrieval system
