Setaria viridis (green foxtail): 117845480
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Entry
117845480 CDS
T07951
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117845480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117845480
04147 Exosome [BR:
svs04147
]
117845480
04090 CD molecules [BR:
svs04090
]
117845480
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117845480
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117845480
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117845480
CD molecules [BR:
svs04090
]
Proteins
117845480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
AAA_16
AAA_22
RsgA_GTPase
AAA_21
AAA_15
AAA_30
AAA_28
Motif
Other DBs
NCBI-GeneID:
117845480
NCBI-ProteinID:
XP_034582423
LinkDB
All DBs
Position
1:5177166..5186330
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AA seq
1244 aa
AA seq
DB search
MGKDVGPPEAAAKKAAPALRSFASVFMHADAADVALMVLGLVGAMGDGLSTPVMLLITSR
IFNDLGNGPDLLQEFSSKIDENARNLLFLALANWVMAFLEGYCWARTAERQASRMRERYL
RAVLRQDVEYFDLKVGSTSEVITSVSNDSLVVQDVLSEKVPNFVMNCSMFLGSYAVGFAL
LWHLTLVALPSVLLLIIPGFMYGRILIGLARRIREQYTRPGAIAEQAVSSVRTVYSFVAE
RSTMARFSAALEESARLGVKQGLAKGVAIGSNGITFTIWAFNVWYGSRLVMYHGYKGGTV
FAVSAAIVVGGLALGSGLSNVKYFSEASSAAERVQEVIRRVPKIDSESNAGEELANVAGE
VEFKNVEFCYPSRPETPIFVSFNLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEV
SLDGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEDATEEEVVAAAKAANAHN
FISQLPQGYDTQVGERGIQMSGGQKQRIAIARAILKSPKILLLDEATSALDTESERVVQE
ALDLASVGRTTIVIAHRLSTIRNADMIAVMQYGEVKELGSHDELIANENGLYTSLVHLQQ
TRDSREANEVGGTGSTSAAGQSSSHSMSRRFSAASRSSSGRSMGDEENDNSTDKPKLPLP
SFRRLLMLNAPEWKQALMGSFSAIVFGGIQPAYAYAMGSMISIYFLTDHNEIKDKTRTYA
LIFVGLAVLSFLINIGQHYNFGAMGEYLTKRVREQMLAKILTFEIGWFDRDENSSGAICS
QLAKDANVVRSLVGDRMALVIQTVSAVLIACTMGLVIAWRLALVMIAVQPLIIVCFYARR
VLLKSMSKKSIQAQSESSKLAAEAVSNLRTITAFSSQERILRLFDQAQDGPRKESIRQSW
FAGLGLGTSMSLMTCTWALDFWYGGKLMAEHHITAKALFQTFMILVSTGRVIADAGSMTT
DLAKGADAVASVFAVLDRETEIDPDNPEGHKPEKLKGEVDIRGVDFAYPSRPDVIIFKGF
SLSIQPGKSTALVGQSGSGKSTIIGLIERFYDPLRGVVKIDGRDIKTYNLRALRRHIGLV
SQEPTLFAGTIRENIVYGTETATEAEIENAARSANAHDFISNLKDGYDTWCGERGVQLSG
GQKQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMVGRTSIVVAHRLSTIQ
NCDQITVLEKGIIVEKGTHASLMAKGPSGTYFGLVSLQQGGNQH
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggacgttgggccgccggaggcggcggcgaagaaggcggcgccggctctgcgg
tcgttcgcgtcggtgttcatgcacgcggacgcggcggacgtggcgcttatggtgctgggc
ctggtgggcgccatgggcgacggcctgtccacacccgtcatgctcctcatcaccagccgc
atcttcaacgacctcggcaacgggcctgacctcctccaggagttcagctccaagatcgac
gagaacgcgcggaacctcctcttcctggcgctcgccaactgggtcatggcgttcctagag
ggctactgctgggcgcgcacggcggagcggcaggcgtcgcggatgcgggagcggtacctc
cgggcggtgctccggcaggacgtggagtacttcgacctcaaggtcggctcgacgtcggag
gtgatcaccagcgtctccaacgacagcctggtcgtgcaggacgtgctgagcgagaaggtg
cccaacttcgtgatgaactgctccatgttcctgggcagctacgccgtcggcttcgcgctg
ctgtggcacctcacgctggtggcgctgccgtcggtgctcctcctcatcatcccgggcttc
atgtacggccgcatcctcatcggcctcgcgcgccgaatcagggagcagtacacgcgcccg
ggcgccatcgccgagcaggccgtctcctcggtgcgcaccgtgtactcgttcgtggcggag
cggagcaccatggcgcggttctccgccgcgctcgaggagtcggcgcggctcggggtcaag
caggggctcgccaagggcgtcgccatcgggagcaacggcatcaccttcaccatctgggcg
ttcaacgtctggtacggcagccgcctcgtcatgtaccacggctacaagggcggcacggtg
ttcgccgtctccgccgccattgtcgtcggcggcctagctctggggtcggggctgtcgaac
gtgaagtacttctcggaggcgagctcggcggcggagcgggtccaggaggtgatccggcga
gtgcccaagatcgactcggagagcaacgctggcgaggagctggccaacgtcgccggcgag
gtggaattcaagaacgtcgagttctgctacccatcgcggccggagacccccatcttcgtg
agcttcaacttgcgcgtgccggcggggcgcacggtggcgcttgtcggcggcagcgggtcc
ggcaagtccaccgtgatcgcgctgctggagcggttctacgacccgtcggccggcgaggtg
tccctcgacggcgtcgacatccggcggctgcggctcaagtggctgcgcgcgcagatgggg
ctcgtcagccaggagccggcgctgttcgcgacgtcgatcagggagaacatcctgttcggc
aaggaggacgccacggaggaggaggtcgtcgccgcggccaaggcggccaacgcccacaac
ttcatctcccagctgccgcagggctacgacactcaggtaggtgagcgtggtatccagatg
tctggaggacagaagcagaggattgctattgccagagctatccttaagtcacctaagatc
ctcctccttgatgaagccacaagcgcattggacacagagtcagagcgtgttgtgcaagag
gcactagacctggcctccgtgggtcggacaactattgtcattgcacatcggctctccaca
atccggaatgctgacatgattgctgtgatgcaatatggtgaggtcaaggagctgggctcc
catgacgagctcattgccaatgagaatggcctctacacatctcttgtccaccttcagcag
accagggattcaagggaggctaacgaggttggtggaactggaagtacatctgctgcgggg
caatctagcagccacagcatgagcaggaggttctctgcagctagtaggtcaagctcagga
cggtcgatgggtgatgaagaaaatgataatagtaccgacaagccaaagcttcccctccca
tcattcagaaggttactgatgcttaatgcaccagagtggaagcaggctctgatgggaagc
ttcagtgctattgtgtttggaggcatacagcctgcatatgcatatgccatgggaagcatg
atctcaatctacttcttgacagaccataatgagatcaaggacaaaacaaggacctatgca
ctcatctttgttggtcttgcagtgctctcattcttgatcaatattgggcaacattacaac
tttggtgccatgggggaatacctcactaagagagtgagagaacagatgcttgcaaaaatc
cttacttttgagattgggtggtttgaccgtgacgagaactccagtggtgccatatgctca
caacttgccaaggatgccaatgtcgtgaggtcacttgtgggtgatcgaatggctctagtg
atccagacagtttctgcagttctcatagcctgcaccatgggtctggtgatagcgtggcgt
ttggcccttgtcatgatagcagtgcaaccccttatcattgtttgcttttatgcccgtcgt
gtcttactgaagagcatgtccaagaaatcaatacaggcacaatctgaaagtagcaagcta
gcagctgaagctgtatccaatctccgcaccatcactgctttctcatcccaggaacgcatc
ctacgcctctttgatcaagcacaggatgggccacgcaaggaaagcatcaggcagtcatgg
tttgcaggactgggcctaggcacctccatgagccttatgacatgcacatgggccctcgat
ttctggtatggtggcaagctcatggctgagcatcacataactgccaaggcactcttccaa
accttcatgattctagtaagcacagggcgtgtgattgcagatgcaggtagcatgacaaca
gaccttgctaagggtgctgatgcagtggcttcagtgtttgctgttcttgacagagaaact
gaaatcgaccctgacaaccctgaggggcacaagccagagaaactaaaaggcgaggttgac
attagaggagttgactttgcttacccctcgaggccagatgtgattatcttcaaagggttc
tccttgagcatccagccaggcaagtcaacagcccttgttgggcaaagtggttctggcaag
tcgacaatcattgggcttatagagaggttctatgacccacttcggggggtagtgaagatt
gatggtagagacatcaaaacatacaatctcagagccctgcggcgtcacatcggattggtc
agccaggaaccaacactatttgcaggtacaataagagaaaatattgtgtatggtacagaa
acagcaactgaagcggaaattgagaatgcagcaaggtctgccaatgcacatgactttatt
agcaacctcaaggatggatatgatacatggtgtggtgagaggggtgttcagctttcagga
ggccagaaacaacgcattgcaattgcacgtgccatcctgaagaaccctgcaatcctgctc
ctagatgaagcaacaagtgcactggacagccagtctgagaaggtggtacaagaggcattg
gaccgagtgatggtcggcaggacaagtattgtggtggcgcacagactcagtacaatccag
aattgtgaccagatcactgtgcttgagaagggaattattgtggagaagggcacacatgca
tcccttatggccaagggtccctctgggacatactttggattggtcagcttgcaacaagga
ggcaaccagcattga
DBGET
integrated database retrieval system
