Setaria viridis (green foxtail): 117845501
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Entry
117845501 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117845501
Membrane trafficking [BR:
svs04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117845501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
117845501
NCBI-ProteinID:
XP_034582450
LinkDB
All DBs
Position
2:10172850..10176590
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AA seq
496 aa
AA seq
DB search
MSARREVVSYHPLPAPGAVNSFKDEIQSKVMETVGNAINSFDPKSLPQHIERGLGTAGNI
INSFEPKWSGQKEFDFGGEADPLDGYQCPDEYWGSAPAKAQKPVNLKNLLGGAIAIIGRS
LKNTEVEQPKETKTSVSFLGSSDDGNTFLHSSVYMPSAPPVLDEEALNYNIYRAVLEAEP
PEWLPDSYARSCMQCAAPFTAVTRGRHHCRFCGGIFCTVCSKGRCLLPVKFRERNPQRVC
DACYDRLDPLQNLLINSVSNASQTAKHDVMDWTCARGWLNLPIGLTMEHEIYKAANTLKS
YSQVARINPEKSIPHAVLNGASGLAILTVVKVGAILTYKLGTGLVVARRSDGSWSAPSAI
LSGGFGWGAQVGGELMDFIIVLRGPEAVQTFCSRMHFSLGAGVSAAAGPVGRVLEADMRA
GDKGSGVCYTYSCSKGAFIGVSLEGNLVATRIDANLRFYGDPYLTTSDILMGHVERPNAA
KFLYTALDDLYSGLEC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacgtagggaggttgtctcgtaccacccgctgcctgcaccaggagcagtgaac
agcttcaaggatgagatccagtcaaaagttatggaaacggttggcaatgcaatcaactca
tttgatccaaagtcgttgcctcagcatatagaaaggggattgggaacagctggaaacatt
attaattcatttgagccaaagtggtctgggcaaaaggagtttgattttggtggggaagct
gatcctcttgatggatatcagtgccctgatgagtattggggatctgcaccagcaaaggcg
caaaagccagtaaaccttaagaacctgctggggggtgcgattgcaatcattggtcgtagt
ttgaaaaatactgaagttgaacagccaaaggagactaagaccagcgtctctttcttgggt
tcaagtgatgatgggaatacgttcttgcattcctctgtctacatgccaagtgctccacca
gtgcttgatgaagaagccctgaattacaacatttatagggctgtattggaagcagagcca
ccagaatggcttcctgacagttatgctagatcctgcatgcagtgtgctgctcctttcact
gctgtcacccgaggaaggcatcattgtcgattctgtggagggatattttgcacggtgtgc
tcaaaaggacgatgtcttttgcctgtcaagttccgtgagcgcaatccacaaagagtctgt
gatgcttgttatgataggcttgatccattgcagaacctattgattaattctgtaagtaat
gcctcacaaactgcaaagcatgatgtgatggattggacttgtgcaagagggtggttaaat
ttgccaatcgggttaacaatggagcatgagatttacaaggcagcgaataccttgaagagt
tacagccaggttgcaagaataaaccctgagaagtctattccccatgcagtccttaatgga
gcaagtgggcttgccatattgacagttgtgaaagttggtgctattcttacttacaaactt
gggactggcctagtagttgctcggagatctgatgggtcctggtctgcaccatctgctata
ctttctggtggttttggatggggagcacaggttggtggtgagctaatggatttcatcata
gtgcttcggggtccagaagctgtccaaacattctgcagtcgaatgcatttttcgctaggg
gcaggtgtaagtgctgcagcaggacctgtgggcagagtactagaagcagacatgagagct
ggtgataaaggatcaggagtttgttatacatatagctgcagcaaaggtgcattcattggt
gtttcattagaagggaatctagttgccacgcggatagatgctaatctgcgtttttacggc
gacccatatctaacaaccagcgacattcttatggggcatgtggaaaggccaaatgctgcc
aagtttctttacactgcgttggatgatctgtactcagggctggaatgctag
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