Setaria viridis (green foxtail): 117845604
Help
Entry
117845604 CDS
T07951
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117845604
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117845604
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117845604
03036 Chromosome and associated proteins [BR:
svs03036
]
117845604
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117845604
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117845604
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117845604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
117845604
NCBI-ProteinID:
XP_034582560
LinkDB
All DBs
Position
2:10483788..10488467
Genome browser
AA seq
511 aa
AA seq
DB search
MMKQIFGRRKASKSADKESIGGRRHAVSNQQSGSGVADQSGQQPILSSTGHACGSGNRMG
FQESRINDGLFASHFGPLPSIKDMPNAEKQNLLIVKLNMCCTQFDFTDPTRNMREKKIKG
ETMMDILDYVKTANTKFPEIVVEGITKMISENLFRTLVIPPREKKVLQAFDLEEDEPLMD
PAWPHLHIVYELLLNFVQSPETDAKLAKRYVDHSFILRLLELFDSEDLRERDYLKTVLHR
IYGKFMVYRPFIRKAINNVFYQFIYETEKHNGIAELLEILGSIINGFALPLKEEHKLFLV
RTLIPLHKPRCISMYHRQLSYCITQFVEKDEKLADTIIRGIIKCWPVTNSPKEVLFLGEL
EEILEATQPSEFQKCMVPIFSQVARCFNSSHFQVAERALFLWNNDRVYNLISQNSKVILP
IILPALEKNINGHWNLAVRSLSLNVQKLFSEREAELFAECMLTYEEDKVREEARKLKQEA
AWKRLDEIASDKVTSGEAVLISPTLPRQPSV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagatatttgggcggcgcaaggcgtccaaaagtgcagataaggaatcgatt
ggtgggaggaggcatgccgtgtcgaaccagcagtcgggttctggagttgccgaccagagt
ggccagcagccaattttgtcgagtactggacatgcctgcgggagtggaaaccgtatgggg
ttccaggagtcgaggataaatgatggtttgttcgcttctcacttcgggccgttgccgagc
attaaggatatgccaaatgcagagaaacagaacctgctcatcgtaaagttgaacatgtgc
tgcacccagtttgactttacggatccgacaaggaacatgagggagaagaaaataaagggg
gaaacaatgatggatatacttgattatgtcaaaacagctaacaccaagttccctgagatt
gttgtggagggaatcacaaaaatgatttcagaaaacttgttcaggacgctggttatccca
cccagggagaaaaaggtgcttcaagcttttgatttagaagaggatgaaccattgatggac
cctgcatggccacatttgcatattgtctatgagttgctcttgaattttgttcaatctcca
gaaactgatgctaaattggctaaaagatatgttgaccattcctttattctaaggctgctt
gagctctttgattctgaggaccttagggagagggactaccttaagacggtacttcaccgt
atctatgggaagttcatggtgtatcggccatttatccggaaagctatcaataatgtattc
tatcagttcatatatgaaactgaaaagcacaatggaatagcagagctcttggaaatttta
ggaagtatcatcaatgggtttgctttgccactcaaggaagagcacaaactgttcctagta
aggaccttaattccacttcacaagccaaggtgcatttcaatgtaccatcggcagttgtct
tactgcattacacagtttgttgaaaaagatgaaaagcttgcggatactattattaggggc
atcatcaaatgttggcctgtcacaaacagcccaaaagaagtactcttcttgggtgagttg
gaagagatattagaagcaacacaacctagcgagtttcaaaaatgtatggttcctattttc
tcccaggttgctcgctgctttaacagctctcacttccaggttgctgagagagcattgttt
ttgtggaacaatgaccgcgtgtataatttgattagtcaaaacagtaaggtgatcctgcct
atcatcttacctgcattggagaaaaatataaacgggcactggaacctggccgtgcgaagc
ctcagtctgaatgtgcagaagttgttctccgagcgtgaggctgagctgtttgctgaatgt
atgctgacatatgaagaagacaaagttagagaggaggcacgtaagcttaagcaggaggca
gcatggaaacgtctggatgagattgcatcagacaaagtcacaagtggcgaggctgtcctt
atctctccaaccttgcctcgccaaccttcggtgtag
DBGET
integrated database retrieval system
