Setaria viridis (green foxtail): 117845680
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Entry
117845680 CDS
T07951
Name
(RefSeq) protein argonaute 18
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117845680
03036 Chromosome and associated proteins [BR:
svs03036
]
117845680
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117845680
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117845680
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117845680
microRNA pathway
RISC loading complex
117845680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
TetR_C_27
Motif
Other DBs
NCBI-GeneID:
117845680
NCBI-ProteinID:
XP_072148080
LinkDB
All DBs
Position
2:38907951..38914253
Genome browser
AA seq
1001 aa
AA seq
DB search
MASHHRGGGRAGGGGRDQANPNVAQGGRAYGGGGGRGGQYYGDDSGGRGGGGRGFDGRGG
GYHGGRDGGRGAGGYQGGRDGGGGRGYGGYQEGHGGGRGAGGYQGGRDGGRGGRGVGGYQ
QEGRGGGRGGYQGYGGRGGGNDYYGRGHGRQQSQRPDLRQAGPPLMDRYAAEAAALREKF
KMMDIHRDAPMFPARPGFGTVGQPCVIKANHFFAGLVDKGLHHYDVTISPETTLKGVYRQ
VMSKLVSEKRQTELGGRLPAYDGRKSLFTAGELPFKSKEFEVTLPGRTERRYKVLIKHAT
SVSLHQLMMLMAGYHTDIPGQALQVLDIVLHDIVLNERNNMEYIAVGRSFFSPAIDTVNL
GLGAEGWKGFYQSIRPTQMGLSVIVDLSSTAFVRPLPLIDFVMEILNKDNPRAFRSITNM
DYVKIKKALRGVRVEVTHRGDACRKYRIATVTQSRPSVLDFESSSGVRKTVTDYFREAYQ
LEIQYDFLPCLQVGSDQRPNYLPMEVCKIVPGQQYQKKLESQQVSKLMDSICLHPSVREG
NICQVVKHNDYNGTERANEFGLEVDYQPTSVQARVLPAPTLRYYGTGSDSICNPNGGHWN
MINKKVVDGARVRNWVCINFCHDLHMNIVHKFCSDLVGWSCTTGLNMDNLRLPIFTARPD
QVEADLRMRYQDARNKLGGQKIDLLLAILPEKNGSLYGNFKRICETEIGIMSQCCLGKFV
TSARAPYFANVAIKINAKLGGRNTEFANPQQSLPVVSSEPTIIFGADVTHPAALDDTAPS
IASVVASQDWPNVAKYNGVVRAQGHRQELIDGLEDIVKDGVSEGQFKQVLEQEIPEIEKA
WKALYNEKPQITFIVVQKRHHTRLFPSDRRSADRTGNILPGTVIDRNICHPTEFDFFLCS
HAGIKGTSRPTHYHVLRDDNKFTADGLQSLTYNLCYMYSNCTRSVSIAPPAYYAHKLAFR
ARFYVNQGSDVASSSNLSARAAGPNPLPQIKDELKRSMFYC
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccatcaccgtggaggaggacgggccggaggtggcggccgggatcaggcgaac
ccgaacgtcgctcaggggggcagggcctacggcggaggtggcggccgaggcgggcagtac
tacggcgatgacagcggtggacgcggtggtggcggccgtggcttcgacggccgtggcggc
ggctaccatggaggccgtgatgggggacgaggtgctggcggctaccaaggtggccgtgat
gggggcggtggccgaggctacggtggctaccaggaaggccatggcggaggccgaggtgct
ggcggctaccagggaggccgtgatgggggccgtggcggcagaggcgttggcggctaccag
caggaaggccgtggcggggggcgtggtggctaccagggatacggcggccgcggtggtggc
aacgactactatggacgcgggcatggcagacagcaaagccagcgtcccgatctgcgccaa
gctgggccgcccctcatggatcgctacgcggccgaggccgctgcgctgcgggagaagttc
aagatgatggacatccaccgtgacgcgcccatgttcccggcgcgccccgggttcggcacc
gtagggcagccatgcgtcatcaaggccaaccacttcttcgccggcctcgtcgacaagggt
cttcaccactatgatgtgacgatctcaccggagacgacgctgaagggagtatacaggcag
gtcatgtcgaagttggtgtccgagaaacggcagactgagctcggtggtcgcctcccggcc
tatgacggccggaagtcgctgttcaccgctggcgagctgccgttcaagtccaaggagttc
gaggtcaccttgcctggcaggacggagaggaggtacaaggtgctgatcaagcacgccacg
tcagtcagcctgcaccagctgatgatgctcatggccggctaccacacggacattccaggg
caggcgctccaggtcctcgacatcgtcctgcatgacatcgtgctcaacgaacgcaacaac
atggagtacattgctgttggccggtccttcttctcaccggccatagacactgtaaatctt
ggcctgggtgccgagggatggaagggtttctatcagagcatcaggccgacacagatgggc
ttgtctgtgatcgtagacttatcttctacagctttcgttcgacccctgccgctgattgat
tttgttatggagattctgaacaaagataacccgcgggccttcagaagtattactaacatg
gactatgtgaagatcaagaaggccctcaggggtgtgagggttgaagtcacacaccgagga
gatgcatgccgaaagtaccggattgccaccgtgacgcaaagtcgtccttctgtattggac
ttcgaatcatcatctggagtgcggaagactgtcacggattacttcagagaggcataccag
ctggaaatacagtatgattttctcccgtgtcttcaagttggcagtgatcagaggccaaac
tatctccctatggaggtttgcaagatagttcctggacagcagtatcagaagaagctggaa
agccaacaggtatctaagctaatggactcaatctgcctgcacccatctgttcgcgagggc
aacatttgtcaggttgttaagcacaacgactacaatggaacagagcgtgcaaatgaattt
ggcttagaggttgactatcagcctacttcggttcaggctagagttctgccagctccaact
ctgaggtactatggtactggatctgatagtatatgcaaccccaatggtggacattggaac
atgataaataagaaagtggtagatggtgcaagggtccgcaactgggtctgcattaacttt
tgtcatgatttacacatgaatattgttcataaattctgctctgatctggttggatggtct
tgtactactggactgaacatggataacttgaggcttcctatattcactgctcgtcctgat
caagttgaagctgatcttcgtatgcgctatcaggatgcacggaacaagcttggagggcaa
aagattgaccttctgcttgctatattaccagagaaaaatggtagcttatatggaaatttc
aaaaggatttgtgagacagagattgggatcatgtcgcagtgttgtctggggaaatttgtt
acaagtgcacgtgctccgtactttgctaatgttgctattaagatcaatgccaagcttggg
ggaaggaacacagaatttgctaacccccaacaaagtttaccagttgtttcgagcgaacca
acgattatatttggtgctgatgttactcaccctgctgctctagacgatactgctccatcc
attgcttctgttgttgcctcccaagactggcccaatgtggccaagtataatggtgttgtc
cgtgcgcaaggccaccgtcaagagctcatcgatggcctggaagacattgttaaggatgga
gtaagcgagggccaattcaaacaagtgttggaacaagaaatcccagagatagagaaggca
tggaaagctctgtataatgagaagccacaaatcaccttcatagttgtgcagaagaggcac
cacacaaggctcttccccagtgatcgccgctcggcggacaggactggaaatattctacct
ggcactgttatcgataggaatatatgccacccaacagaatttgatttcttcctatgcagc
catgctggtatcaagggaacaagtcgtcctacacattaccatgtgctgcgagatgacaac
aagttcactgcagatggtctgcagtctctcacatataacttgtgctacatgtattcgaac
tgcactcgctcggtgtcaatcgctcctcctgcatactacgcccacaagctcgcattccgt
gcccgcttctacgtcaaccaaggctctgatgtggcgagctccagcaatttatctgctcgt
gctgctggtccgaacccacttccgcagatcaaggatgagctcaagaggtccatgttctac
tgctag
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integrated database retrieval system
