Setaria viridis (green foxtail): 117845729
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Entry
117845729 CDS
T07951
Name
(RefSeq) peroxisome biogenesis protein 2
KO
K06664
peroxin-2 [EC:
2.3.2.27
2.3.2.36
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117845729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117845729
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117845729
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117845729
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
117845729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117845729
NCBI-ProteinID:
XP_034582687
LinkDB
All DBs
Position
1:complement(9244194..9251879)
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AA seq
337 aa
AA seq
DB search
MSLVESTSASEGPPPQDAWHAEFQRLLPLWESLRDSSKVIIPISISRVNQFDAARLDVEM
SAMLKEQLVKVFSLMKPGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER
VVPIIGKEVRTGLEGPGLSVSQKIFYCISFVGGQYIWSRLQSFSAFRRWGDLEQRPLARR
AWGLVQNAEGLYQAASFFNLLLFLYGGRYKTIVERILKARLVYGSPNMNRAVSFEYMNRQ
LVWNEFSEMLLLLLPLLNSSSVKKFLLPFSKDKSAGSFGDEADCPICRSSPSIPFIALPC
QHRYCYYCLHTRCSATSSYRCPRCNEVVVAIQRQGSV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgttgagtccacctctgcttcggaggggccgccgccacaggacgcatggcac
gcggagtttcagcgcctcctcccgctctgggagtcgctgcgcgattcatccaaggtcatt
atcccaatttcaatatctagggtgaaccagtttgatgctgcaaggctagatgtcgagatg
tctgccatgttgaaagagcagctagtcaaagtgttctctttgatgaagccaggactctta
ttccaatatgagcctgaactcgatgctttcctcgaattcctcatctggaggttctcgatt
tgggttgacaagccaaccccaggcaatgcattgatgaacctaagatatagagatgagcgg
gtagtgcccatcattggaaaagaagtaagaacaggtttggaaggacctgggctttctgtt
tctcaaaagatcttttattgtattagctttgttggtggccaatatatatggtcgcgattg
cagtccttttctgctttccgtcgatggggtgatttggaacagagaccactagcacgccgt
gcctggggcttagtgcagaatgctgaaggattgtaccaagctgcttcattcttcaaccta
ttattgttcctttatggtggaaggtacaaaactatcgtagaaagaattctgaaagcaaga
cttgtttatgggagccccaacatgaatagagctgttagctttgagtacatgaatcggcag
ctggtttggaatgagttttcggaaatgttgcttttgcttcttccgctcttaaactcatcc
tctgtaaagaagttccttcttcccttctccaaagataagtcggcaggttcttttggtgat
gaagcagattgtcctatatgtcggtccagtcctagcattccttttatagctcttccatgt
caacacaggtactgctattattgcctacacacacgatgttcggctacgagttcttacaga
tgtccacgttgtaacgaggttgttgttgcaattcaaagacaaggatcagtttag
DBGET
integrated database retrieval system