Setaria viridis (green foxtail): 117845830
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Entry
117845830 CDS
T07951
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117845830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117845830
03032 DNA replication proteins [BR:
svs03032
]
117845830
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117845830
Prokaryotic type
117845830
DNA replication proteins [BR:
svs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
117845830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
117845830
NCBI-ProteinID:
XP_034582806
LinkDB
All DBs
Position
2:complement(45212665..45214723)
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AA seq
580 aa
AA seq
DB search
MSSTPPAVASPASEQAKSKKKKHKSKDAAAAIDPPSLAEAEEKTDGYLIKPQSLVPSLDA
STWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWI
KRLLRAEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARFHAAVPDTARV
ARALEALTGAVFQRPPLISAVKRQLRVRTIYESKLLEHDPERHLAVFWISCEAGTYVRTL
CVHLGLLLGVGAHMQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNHKDESYLRRIVMPL
EVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGIAE
MTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKLIAEGLLDKHGKPNEKTP
AEWLRNVVLPTGGDVSIASIAAAPEPEKAKVEQDAVGGEEVKEKKRKKDEENDDGDASIP
VKKIKVEEAAEVVEGEKSEKKKKKKKDKAESGSAELKEEKVDVADEKDGSEKKKKKKKSK
EGSDVTDPEIAQTRDSAESEKSEKKKEKKKKKSRDAEEAQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccacgccgccggccgtcgcgtcccccgcttccgagcaagccaaatccaagaag
aagaagcacaagtcgaaggacgccgctgccgccatcgatccgccatcgctcgccgaggcc
gaggagaagaccgatggctacctaatcaagccccagtccctggttccgtccctcgacgcc
tccacatggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactac
acccctctcccctccggccactcgccgctcaagcgtcccctcgccgagtacctccggtac
ggcgtcatcaacctcgacaagccatccaacccgtcctcccacgaggtggtggcctggatc
aagcgcctcctccgcgccgagaagaccggccacagcggcacgctcgatcccaaggtcaca
ggcaacctcatcgtctgcgtcgaccgcgccacgcgcctcgtcaagtcgcagcagggcgcc
gggaaggagtacgtctgcgtcgcgcgcttccacgccgccgtgcctgacacggcccgcgtg
gcgcgcgcgctcgaggcgctcacgggcgccgtcttccagcgcccgccgctcatctccgcg
gtgaagcgccagctcagggtgcggaccatctacgagagcaagctgctggagcacgacccc
gagcgccaccttgcggtgttctggatctcctgtgaggcaggtacctatgtccggactctc
tgtgtgcaccttggcctgctccttggcgtcggcgcccatatgcaggagctgcgccgtgtc
cggtcggggatcctgggggagcaggacaacatggtgaccatgcacgatgtgatggacgcg
atgtggtcgctcgacaaccacaaggacgagtcctacctgaggcgcatcgtcatgccgctt
gaggtactgcttactagctacaagaggcttgttgtgaaggactctgctgtgaatgctatc
tgctatggtgctaagctcatgatccctgggttgcttcggtttgagaatgatattgagact
ggagaggaggttgttctgatgacaacaaagggggaggccattgctataggtattgctgag
atgaccactgctgtcatggcgacttgtgaccatggtgcggtcgcaaagatcaagagggtt
gtgatggacagagacacatacccgaggaagtgggggcttggcccagtggccctcaagaag
aaaaagctgattgctgagggcctccttgataagcatgggaagccaaatgagaagacccca
gctgagtggctccggaatgtggtgcttcccactggcggtgatgtatcgattgctagcatt
gcagctgctcctgagccagagaaggcaaaggtggaacaggatgctgtcggcggtgaagag
gtcaaggagaagaagaggaagaaggatgaggagaatgatgatggtgatgcttccattcct
gtgaagaagatcaaggttgaggaagctgctgaggtagtggaaggggaaaagagtgagaag
aagaagaagaagaagaaagataaggctgaatcaggatcggcggaactgaaggaggagaag
gttgatgtggctgacgagaaggatggaagcgaaaagaaaaagaagaagaagaagagcaag
gaaggaagcgatgtcacggatccagagattgctcaaacccgagacagcgcggaatctgag
aagagcgagaagaaaaaggagaagaaaaagaagaagagtcgagatgcagaggaggcgcag
tag
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