Setaria viridis (green foxtail): 117845917
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Entry
117845917 CDS
T07951
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117845917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117845917
04147 Exosome [BR:
svs04147
]
117845917
04090 CD molecules [BR:
svs04090
]
117845917
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117845917
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117845917
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117845917
CD molecules [BR:
svs04090
]
Proteins
117845917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
ABC_ATPase
RsgA_GTPase
AAA_16
Zeta_toxin
AAA_30
AAA_15
AAA_28
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117845917
NCBI-ProteinID:
XP_034582883
LinkDB
All DBs
Position
1:26985196..26992919
Genome browser
AA seq
1240 aa
AA seq
DB search
MAGGEAAEVAATAPSLMSVFKHADGVDVALMVLGLVGAMGDGMSTPAVLLISSRITNDFG
RGPDQVHDFSARINTNVRNIVFLACASWVMAFLEGYCWARTAERQASRMRARYLQAVLRQ
DVEYFDLRSGSTSEVVAGVSNDSLVVQDALAEKVPNFVMNAAMFAGSYAVGFAVLWRLTL
VALPSVLLLVVPGIMYGRVLTGLARRIRAQYARPGAIAEQAVSSARTVYSFVAEASTVGR
FSAALEESVRLGLKMGLAKGVAIGSNGVTFAIWAFNAWYGSRLVMYHGYQGGTVFAVSSC
IVQGGLALGNALSKLKYLSEASSAAERIQEVIRRVPKIDSGSDAGEELTGFAGEVEFRNV
QFCYPSRPESPVLVNFNLHVPAGRTVALVGGSGSGKSTAIALLERFYDPSAGEVALDGVD
IRRLRLRWLRAQMGLVSQEPVLFAMSIRENMLFGKEDATAEMVAAAARAANAHSFISQLP
QGYDTQVGERGVQLSGGQKQRIAIARAILKSPKILLLDEATSALDTESEHAVQEALDLAS
VGRTTIVVAHRLSTVRNADMIAVMQSGEVKEQGSHDDLIANENGLYSTLVRLQKTKDSGE
ANKISGIGTMSAAIGQSNRHSMSRRFSWALRSSSARSVGDAKDVDSIDKPSLSAPSFKRL
LMLNAPEWKQALMGSFSAVLIGSIQPIYAYVMGSMFSVYFLTDHGEMKDRTRVCALTFVG
LAVISFLLNMLQHYNFGAMGEYLTKRIREQMLTKILTFEIKWFDSDENSTGAICSRLAKD
ANVVRSLVGDRMALVIQTISAVLIACTLGLVTSWRLALVMIAVQPLIVAGFYARCVLLRS
TSKKSLHAQFESSKLAAEAVSNLRTITAFSSQNRILCLFNQTQDGPRKESVRQSWFAGLG
LSTSVGLMVCTWALDFWYGGKLMAEHQITDKALFQTFMILVSTGRVIAEAGSMTTDLAKG
ADAASSVFAVLDRETKIDPDDPKGHKPERLEGRVEITGVDFAYPSRPDVIIFQGLSLTVD
QGKSTALVGPSGSGKSTVIGLIERFYDPLKGVVKIDGRDIKMYNLHALRRQIGLVSQEPT
LFAGTIRENIMYGTDIASEAEIEDAARSANAHDFISNLKDGYNTWCGERGFQLSGGQKQR
IAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMTGRTSIVVAHRLSTIQKCDLI
VVLEKGIVVEEGTHSSLMAKGPSGKYFGLVSLQQGGRSWH
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggggaagccgctgaggtcgcggcgacggcgccgtcgctcatgtcggtgttc
aagcacgcggacggggtggacgtggcgctgatggttctgggcctcgtgggcgccatgggc
gacggcatgtccacgccggcggtgctgctcatctccagccgcatcaccaacgatttcggc
cgcggccccgaccaggtccacgacttcagcgccaggatcaacacgaacgtgaggaacatc
gtcttcttggcatgcgcctcctgggtcatggcgttcctagaggggtactgctgggcgcgg
acggcggagcggcaggcgtcgcggatgcgggcgcggtacctgcaggcggtgctccggcag
gacgtggagtacttcgacctcaggtccggctcgacgtcggaggtcgtcgccggcgtctcc
aacgacagcctcgtcgtgcaggacgcgctggccgagaaggtcccaaacttcgtgatgaac
gccgccatgttcgccggcagctacgccgtagggttcgcggtgctgtggcggctcacgctg
gtggcgctgccgtccgtgctgctcctcgtcgtcccgggcatcatgtacggccgcgtcctc
accggcctggcgcgacggatcagggcgcagtacgcgcgcccaggcgccatcgcggagcag
gctgtgtcgtcggcgcgcaccgtgtactcgttcgtggcggaggcgagcaccgtcggccgg
ttctcggcggcgctcgaggagtcggtgcggctcgggctcaagatgggactcgccaagggc
gtcgccatcggcagcaacggcgtcacctttgccatctgggccttcaacgcctggtacggc
agccgcctcgtcatgtaccacggctaccagggcggcaccgtcttcgccgtctcctcctgc
atcgtccaaggcggcctggcactggggaacgcgctgtcgaaattgaagtacttgtcggag
gcgagctcggcggcggagaggatccaggaggtgatccggcgggtgccaaagatcgactcg
ggcagcgacgccggcgaggagctgaccggcttcgccggcgaggtggagttcaggaacgtc
cagttctgctacccgtcgcgccccgagagccccgtcctggtcaacttcaacctgcacgtg
ccggcggggcgcacggtggcgctggtcggcggcagcgggtccgggaagtcgacggcgatc
gcgctgctggagcggttctacgacccgtcggccggggaggtggcgctggacggcgtggac
atccggcggctgcggctcaggtggctgcgtgcgcagatggggctcgtcagccaggagccg
gtgctgttcgccatgtcgatacgggagaacatgctgttcggcaaggaggacgccacggcg
gagatggtcgccgccgcggccagggcggccaacgcccacagcttcatctcgcagctgccg
cagggctacgacacgcaggtgggggagcgtggtgtccaattgtccggagggcaaaagcaa
agaattgctattgccagagcaatcctaaagtcacccaagatcctcctccttgatgaagcc
accagtgcattagacacagaatcagagcatgccgtgcaggaggcacttgacctggcttcc
gtgggccgtactacaattgtcgttgcacatcgcctctccactgtacgaaatgctgacatg
attgctgtgatgcagtctggtgaagtcaaggagcagggttcccatgatgatctcattgcc
aacgagaatggcctctactcaactcttgtccgtcttcagaagaccaaagattcaggtgag
gctaacaagattagtggaattggtacaatgtctgctgctataggacaatccaacagacac
agtatgagcaggaggttttcttgggctctcaggtcaagctcagcacgatcagtgggtgat
gcaaaagatgttgacagcatagataagccaagcctttctgccccatctttcaaaaggcta
cttatgcttaatgcaccagaatggaagcaggcactgatggggagctttagtgcagttctg
attggaagcatacagcctatctatgcatatgtcatggggagcatgttctcagtctacttc
ttgacagatcacggcgagatgaaagatagaacaagggtctgtgcactcacctttgtcggt
cttgcagtgatctcattcttgctcaatatgctgcagcactataactttggtgccatgggg
gaataccttacaaagaggattagggaacagatgctcacaaaaattcttactttcgagatc
aaatggttcgacagtgacgagaactccacgggagcgatatgctcgcggcttgccaaggat
gccaatgttgtgaggtcactcgtaggggaccgaatggcgcttgtgatccagacaatttcc
gcggtgcttattgcgtgcaccttaggcttggttacttcttggcgcttggcccttgtcatg
atagcagtgcagccactaattgttgctggcttttatgcccgttgtgtcttactaaggagc
acgtccaagaaatcactacatgcacagtttgagagcagcaaactagctgctgaggcagtc
tccaatcttcgcactatcactgctttctcatcccagaaccgaatattatgcctatttaac
caaacacaggatggaccacgcaaagaaagtgtccggcagtcatggtttgcaggactcggc
ctcagcacctctgtgggtcttatggtatgcacgtgggccctcgatttttggtatggtggc
aagctcatggctgagcatcagattactgacaaggcgctcttccaaaccttcatgattcta
gtgagcacaggtcgtgtaattgcagaggcaggtagcatgacaacagaccttgctaaaggt
gctgatgcagcctcttctgtctttgctgttcttgatcgggaaacaaaaattgatcctgac
gatcctaagggacacaagccagagaggcttgaaggcagggtggagattacaggagttgac
tttgcatacccatcaaggccagatgtgattatattccaagggttgtccttgaccgtagat
caaggaaaatcaacagcccttgttgggccaagtggttctggcaagtcaaccgtcattggg
cttatagagagattctatgacccacttaaaggggtggtgaagattgatggtagagacata
aaaatgtacaatctgcatgctttgcggagacagattgggttggtaagccaggagccaaca
ctgtttgcaggtacaatcagagagaacatcatgtatggcacagacatagcaagtgaggct
gaaattgaggatgcagcaaggtccgcgaatgcacatgacttcattagtaacctcaaggat
ggatataacacatggtgtggtgagcgaggttttcagctttcaggagggcagaagcaacgc
attgctattgcccgtgccatcttgaagaaccctgctatcttgctactggatgaagctaca
agtgcactagacagccagtccgaaaaggtggtgcaagaggcactagaccgagttatgacc
gggaggacaagcatagtggtggcacacaggctcagcactatccagaagtgtgacttgatt
gttgtgcttgagaaaggaattgttgtcgaggaaggcacgcattcatccctcatggccaag
ggtccctcaggaaaatactttggattggttagtttgcagcaaggaggccgcagctggcac
tga
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