Setaria viridis (green foxtail): 117845923
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Entry
117845923 CDS
T07951
Name
(RefSeq) abnormal spindle-like microcephaly-associated protein homolog isoform X1
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117845923
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
117845923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
SPACA9
Motif
Other DBs
NCBI-GeneID:
117845923
NCBI-ProteinID:
XP_034582886
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All DBs
Position
2:complement(40665027..40675224)
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AA seq
1391 aa
AA seq
DB search
MSRREPAASPFRDLSNLLTSTPNPKPVPASPHFFTATKTPLQASTPTPLRRRRPGNGTPA
PTRFGRHLRALEVDQSRSARRAEFGRERALRAFADSASSWLSLLLRDPAACGCSPAATGG
GDRRGERRKEMTPTMVAALRDSLREVCSLEDVTERMEKYMSKDACEEVLVMMFQICKNID
DGRLKMKAHCPLATDLRLKEKATRIFMCYNPDWLRIGLYIVLGGDSLLQSGLGKRDKEFH
FLKLILEKQMFSQIMTAKSSSHKKVVEGHHVQGYSESLGNIILKRIFLFVAALDRAKIES
ALPLEAGIDGLDGGSPLLFYHQGQVKSSRQIIQDSLGEAMHGEGDLLMHLTTMGYKLNYQ
QTALSEYDFTIRSLFEDLQDGIILCRVVQLLLSDSSIILKVIAPSDTSKKRLSNCTTAIQ
YIKQAQVPLSDSDGVTISAEDIAAGDKELSLSLLWNVFIHMQLPLLASTSLAHELTRLSV
PVMSMEQRMSENKSHMGLIYDWVHVICSKSGITVGSSSQFDRRTLNCLMNYYLNIDIFPH
KETQAGCREDLFTCHELGTSTDITSCPSSKMGQVLADIFQEIPASGILADGVLFDEKSAI
ILLAFLSSHLTNDEKLDQLKDLINMRLDHESPVTKISARHRSRGKNGVKYQPPKTDNKDG
SYAIQEWAATVIQTQARSLIAKNKYCKLKKAIFILQGAMRAWSAVTLKSNHSCLTISAST
PWQAHGTYNRYFIFIMERHRFVHMRKSATIIQQAVRIWIRGRKRLENNEPFKRYEFPEGK
TPSKTSSIAPSPQEHCIGDNKTIASATPWQHCEHADTSQASAAHSLCFDGMYSLGSTTSP
LSMFESNCKSTASSQLCEVETSNVISVSKLVSEDEMDCGSNISSQAFFEHGSLVSTRIDL
PVRKESVAAQRIQSAYKESVAAQRIQSAYRRFLYNRNLRITAAIKIQSHWRCYSVRNSFT
KQVRNIVGIQTSIRLSLHHRACQCHQLSAVLVQRFVRGWLARKRLLGSSSLQTYIILDQS
QQRKCHQSLELKIVLHSVIKLQRWWRKFLLHQSVRTSVISIQSFVRGWLARKQLNRIFCC
VNIIQRWWRKVLFLESRKRAVTVIQTHFRSWVAQQDAIRTRNCITTIQRWWRKVLFLQLR
KRAVIVIQAHFRGWAARQTASRTRKSIIIIQSYVKAYLVRKASKQEVAHIRSRLQKSSAL
VDDSMRLINRLVAALSQLRHSRSTRSIRQTCTALSTATEYSKKCCETLVTDGAVDILLKQ
IHLLNRGIPDQEVLKQVFLTLRNIARYPHLRQVLVNIPESAEIIFQELLRNKAAVFFIAS
DILKKLCESKEGHETARALHHHIKRLRSLVQDLEKKVDLDKRNGRTGAVKENNLRQLREA
ATLYHLLTCDT
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcgagcccgccgcctcccccttccgcgacctctccaacctcctcacctcg
acacctaaccccaagcccgtccccgcctcgccgcacttcttcaccgccaccaaaaccccc
ctccaggcttccactccgacgccgctccgccgccggaggcccggcaacggcaccccggcc
ccgacacgcttcggacgccacctccgcgcgctcgaggttgaccagtcgcgctccgcccgc
cgcgccgagttcggccgcgagcgcgccctccgcgccttcgctgactccgcttcgtcatgg
ctctcgctccttctccgcgaccccgccgcctgcggctgctccccggcggccactggtggt
ggtgatcgccgcggggagaggaggaaggagatgacgccgacaatggtggccgcgttacgg
gattctctgagggaggtgtgcagcctggaggatgtcacggagagaatggagaagtatatg
agcaaggacgcgtgcgaggaggtgctcgtcatgatgtttcaaatctgtaagaacattgat
gatggcagactgaagatgaaagcacattgcccccttgctactgatcttaggctcaaagag
aaagcaactaggattttcatgtgctacaatccagattggctcaggattggcttgtatatt
gttctcggcggtgattccttgctacagagtggattaggaaaacgggacaaagagtttcac
tttctaaaactaattctggagaagcagatgttttctcaaatcatgactgcaaagtcttct
tctcacaagaaggtggtcgaagggcaccatgtacagggttacagtgaatcattgggcaat
atcatactgaaaagaatttttctgtttgttgctgcactagacagagccaaaatagaaagt
gctctacctcttgaagctggaatcgatggccttgacggtggatcccctcttttattttat
caccaaggccaagtaaaatctagtcggcaaatcatccaggactctttgggggaggccatg
catggagaaggtgaccttctgatgcacctcacaactatgggatataagctaaattatcaa
cagactgctctgtcagaatatgatttcactataaggagtctatttgaagatctccaagat
ggcataattctttgtagagttgttcagctgctcctgtcagattcatcaatcattttgaaa
gtgattgctccctctgatacaagtaagaagaggttgagtaactgcaccactgctatacaa
tatatcaagcaagctcaggttccattatctgattctgatggagtcacaatttcggcggaa
gacatcgctgctggggataaagagcttagcctttcattgctgtggaatgtgttcatccat
atgcagctgccattgttagcaagcacatcgctagctcatgaattaaccaggctaagtgta
cctgtaatgtcaatggaacaacgaatgtctgagaacaagtcacacatgggcttgatttac
gattgggttcatgtgatatgctcaaaatctggcataactgttggaagttcatctcagttt
gacagaagaacactgaactgcctcatgaactattatttgaacattgatattttccctcac
aaggaaacacaagctggatgccgagaggacttgttcacctgtcatgaacttggtacttca
actgatatcaccagctgtccatccagcaagatggggcaagtacttgctgacatttttcag
gagattccagctagtggtatcctagctgatggtgtattatttgatgagaagagtgccatt
attttgctagctttcctatcttcacatctgactaatgacgaaaaattggatcaactaaag
gatttgataaatatgaggttggaccacgagagcccggtgacaaagatttcagcaagacat
agatctcgaggaaagaatggtgtaaagtatcaacctcctaagacagataacaaagatggc
tcatatgccatccaagaatgggctgcaactgttattcagactcaggcgagaagtcttatt
gcaaagaataaatattgtaagctcaagaaggcaatatttatcctgcaaggtgctatgagg
gcatggtcagccgtcaccttgaaaagtaaccatagttgtctaactatttctgcctctact
ccttggcaagcacatggaacctacaacagatatttcattttcataatggaaaggcataga
tttgtgcatatgagaaaatctgccactataattcagcaggctgtaaggatttggattaga
ggaagaaaaaggcttgagaacaatgagcccttcaaaaggtatgagttcccagaaggtaaa
actccatccaaaactagtagcattgctccttcccctcaggagcattgcattggtgacaat
aaaaccatagcttcagccactccatggcagcattgcgagcatgcagatacatcgcaggct
tctgctgctcatagtctttgttttgatggcatgtacagtctaggttcaaccacttctcca
ttgagtatgtttgagagtaactgtaaaagtactgctagctctcagttgtgcgaggttgag
acgtccaacgtaatttctgtcagtaagcttgtgagtgaggatgaaatggactgtggcagt
aatatttcttctcaagcattctttgagcatggatcgcttgtatctaccaggattgattta
cctgttcgcaaggaatcagtggctgctcagaggatacaatctgcatataaggaatcagtg
gctgctcagaggatacaatctgcatatagaagattcttgtacaacagaaacttaaggata
actgctgcaattaaaatccagagccattggcggtgttattctgtacgcaactccttcaca
aagcaagttcggaatattgtaggaatccagacctcaataagactgtccttgcaccatcgg
gcttgtcagtgccaccagctctctgcagtactggttcaacgatttgtcagaggatggtta
gcaagaaaaagactgttaggttcttcttcgctgcaaacctacataatacttgaccaaagt
caacagagaaaatgtcatcaaagccttgagttaaagattgtgctacattcagtcataaag
ctgcaaagatggtggaggaagttcctgttgcatcagtctgtcagaacatctgttatctca
attcagtcttttgtccgtggttggttggcccggaagcaactaaatcggatattctgctgc
gtcaacatcattcaaagatggtggcgaaaggttttgttccttgaatcaaggaagcgagcg
gtgactgttatccagacacatttccgtagttgggtcgcacaacaagatgctattagaact
agaaactgtattactacaatacagagatggtggagaaaggttttgttccttcaattgagg
aagcgagctgtgattgttatccaggctcatttccgtggttgggcagcacgacaaactgct
tctagaactagaaaaagtattattataatacagtcatatgtcaaagcctacctggtgcgg
aaagcttcaaagcaagaagttgctcatataagatctagactgcagaagtcttctgcacta
gttgatgatagtatgcgcctgatcaacagactggtggctgcactgtcgcagctccgtcac
tctaggagcacacgcagcattagacaaacttgcacagcattgagtactgctacagagtat
tccaagaaatgctgcgagacactagtcactgatggagccgtagacatattgctgaagcaa
atccacttgctgaaccgtgggattcctgaccaggaagtcttgaagcaagtgttccttact
ctcaggaacattgcacgctatccacatcttaggcaggtgttagtcaacattccagaatca
gctgaaatcatcttccaggaattactgaggaacaaagcagccgtgttcttcatagcgtct
gacattctgaagaaattatgtgaatccaaggaaggccatgaaaccgcccgggcactgcat
caccacatcaaaaggctgcgaagtctggtgcaagacctggaaaagaaggtggacctggac
aagaggaatggccgcactggagccgtgaaggagaacaatctacggcagcttcgggaggct
gccacgctctatcatctcctcacttgtgatacttaa
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