Setaria viridis (green foxtail): 117845926
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Entry
117845926 CDS
T07951
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117845926
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117845926
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
Helicases
117845926
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117845926
NCBI-ProteinID:
XP_034582893
LinkDB
All DBs
Position
2:complement(40505031..40508657)
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AA seq
756 aa
AA seq
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MRRPKRRGAGKQTRLREEDEIALLDEWIEAGKPRPGTKPPPPSKSAGAGPAPPAAGEYPE
YGACTRFDELPLSQKTKDALRKKKFMEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFV
IPVIEKLYRERWGPEDGVGCIILSPTNDLAQQIFEVIKDVEEFHNFSAGAIVGKRKGIEL
EKEHINSLNILVCTPGRLVQHFNETPNFDCSQLQMLVLDEADQILDHGFKSQVDAIISQI
PRVRQTLLFSATQTKSVKDLARVSLKNPEYISVHDEATTATPDTLEQYAMIVPLEQKLNM
LWSFIKRHLNSKTIVFLSSVKQVKFVFEIFKKLRPGIPLKCIHGRMTHVVQQAIVADFNE
STSVLFSTDLTSRGLDINNVDWVVQVDCPESIDIYIHRVGRTARYNKKGKSLMFLCPEEE
AMLEKLKATESKIPIHIRKPKAEQLEQISQNIASVLVKFPNLQQLGKRAFVTYLKSVYLQ
KDKKVFDLSRFSAEKFAAYAASLGLPVTPTIRFISHKKNVSKKDMEDIDKKQIKSSSKPE
VIINPQVNSDLTMDDGDDDILYPKKPIADANMDDGLDDVLRPKEPTTDTDTDTKPEKVTE
LGKPLKKKKLKINVHRPMGTRVKYDDEGNIIPPLASLAEEVALEPVVHKDKISQRYAEML
REMREHDKEDKLEHKKSLREKKLQKKMKLKRKRQEETEVGSEEDSGSESDRGRDVASKGK
KRYFKDDDEDDNTVKDGDVLAQQEALALKLLSKMHS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcccgaagcgccgcggcgcggggaagcagacccgcctcagggaggaggacgag
atcgccctcctcgacgaatggatcgaagccggcaaaccccgtccgggcaccaagcccccg
ccgccctcgaaatccgccggagcgggtccggcgcctccggcagccggggagtacccggag
tacggcgcgtgcacgcggttcgacgagctgccgctgtcgcagaagaccaaggacgcgctg
cggaagaagaaattcatggagatgagcgagatccagcgcgccgccttgccccacgctctc
tgcggccgcgacgtcctcggcgcggccaagaccggctccggcaagaccctggccttcgtc
atcccggttatagagaagctgtacagagagagatggggtccagaggatggtgtgggctgc
attattctttcccccacgaacgatttggctcagcaaatttttgaagtgatcaaggatgtc
gaggagttccataactttagtgctggtgctattgttggtaagcgcaagggtattgagcta
gagaaggaacacatcaacagcttgaatatcttggtgtgcacacctgggcgattagtccag
cacttcaatgaaactcccaatttcgattgttcacagctccagatgttggtgcttgacgag
gcagatcaaattcttgatcatggtttcaaaagtcaggttgatgctatcatttctcagatt
cccagagttagacaaactttactgttttccgctacacaaacgaagtcagttaaagacctt
gcaagggttagcctaaagaatccagaatatataagtgtgcatgatgaagctacaacagcc
accccagatactctggagcagtatgccatgattgttcctcttgaacagaagctaaatatg
ctctggagcttcattaaaaggcatctaaattctaagacaatagtcttcttatctagtgtc
aagcaggttaaatttgtttttgaaatttttaagaaactacgccctggtattcctttgaaa
tgtatccatggaaggatgacacatgtagtacagcaggccatagttgcagatttcaatgaa
tccacttcagttctgttctcaactgatttaacctctagaggactggatataaataatgtg
gattgggtggtacaggttgattgcccagaaagcattgatatttacatccatagagttggc
cgtacagctcgttacaataagaaaggaaaatcgcttatgttcctttgtcctgaggaagaa
gcaatgcttgaaaaattgaaggctactgaaagcaaaatacctatacacatacggaagcca
aaggcagaacaactggagcagatatctcagaatatagcctcggtgctggttaaatttccc
aatctgcagcaattgggtaaaagggcatttgttacatatcttaagtcagtgtatctccag
aaagacaaaaaggtgttcgacctgagcaggttctctgcagagaagtttgctgcgtatgct
gcttcacttggtctgcctgttacacccaccatccgcttcataagccacaagaagaatgtg
tcaaagaaggatatggaagatattgataagaaacagatcaaatccagctccaaacctgaa
gttatcatcaatccacaggtcaacagtgatttgactatggatgatggagatgacgacatc
ctttatcccaagaagcccattgcagatgctaatatggatgatggacttgatgatgtcctt
cgccccaaggagcccaccacagatacagatacagatacaaaaccagagaaagttaccgaa
cttggaaagcccttaaaaaagaagaaactgaagataaatgtgcacaggccaatgggaaca
agggtcaagtatgatgatgagggcaacatcatcccacctctcgcatctttagctgaagaa
gtggctttagaacctgtggttcacaaggataaaatttcccagcggtacgcagagatgttg
agagaaatgcgggagcacgacaaggaggacaagctcgaacataagaagagcttgcgggag
aagaagctgcagaagaagatgaagctgaagcgcaagaggcaggaggagacagaagtcggg
tctgaggaggacagcggctcagagtcagacagaggcagagacgtagctagcaagggcaaa
aagaggtacttcaaggacgacgatgaagatgataacactgtgaaggatggtgacgttcta
gctcagcaggaggccttggcgctgaagctcctgagtaaaatgcacagttaa
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