Setaria viridis (green foxtail): 117846292
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Entry
117846292 CDS
T07951
Name
(RefSeq) probable transcription factor RL9
KO
K28174
GARP family transcription factor, KAN subfamily
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117846292
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117846292
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117846292
NCBI-ProteinID:
XP_034583328
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All DBs
Position
2:complement(28200991..28207719)
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AA seq
464 aa
AA seq
DB search
MEASSAASPDLSLHISLPSSAPGAGPSGGRAAVGGAGGVGVGGAGGDPWRRLNGSTASTE
LSLSPPAEQDHAGALPWRHRPSAAAAPSVATTSAGAALMPTMPMLQPLDGGGGLAGGGGG
ASLAAPIRGIPIYNGPGGFPFLPPAAGGDGGHHQKLGFYGSYHPATWPSSLGSTSPSPLA
PGAPPGPLDPASAAFLSPAAHHHHRMLTASGRLNGMLSDTLRGYGAGGMGGLGGIGGHHH
HHHLHGGQPFGLGSRFMPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVL
ELMDVKDLTLAHVKSHLQMYRTVKSTDKPAASSGPNDGGSGDEDFPGAGQAASGGDNMCG
ARPFGEHRSTSEGAASSVGGGGGGDMDQSSAGNTSTRWSNSSRDPWLSSNSCNMDAHRLA
GLSSPIENPEPCRSSSSQVSNHEMSSPSLEFTLGRPDWQGADHD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagctcggcggcgtcgccggacctgtcgctgcacatcagcctgccgagcagc
gcgcccggggccgggccgtccggcgggcgcgccgcggtagggggagcaggcggagtagga
gtaggaggcgcggggggagacccgtggcggaggctgaacgggtccacggcgtcgacggag
ctgtcgctgtcgccgccggccgagcaggaccacgcgggcgcgctgccctggcggcatcgc
ccgtcggcggcggccgcgccctccgtggccaccacgtcggcgggcgcggcgctgatgccc
accatgccgatgctgcagccgctcgacggcgggggcgggctagccggcggaggagggggc
gcgtcgttggcggcgccaatccggggaatacctatctacaacggcccggggggattccct
ttcctgccgccggccgccgggggggacggcggccaccaccagaagctcgggttctacggc
tcgtaccacccggccacgtggccttcctcgctgggctccacgtcgccgtcgccgctcgcg
cccggcgcgccgccgggcccgctcgacccggcgtcggcggcgttcctctcccccgccgcg
caccaccaccaccggatgctgacggcgtcgggcaggctgaacggcatgctctccgacacg
ctccgcggctacggcgccggcggcatgggcggcctgggcggcatcggcgggcaccaccac
caccaccacctccacggcgggcagcccttcggcctgggctcccggttcatgcccaagctc
cccgccaagcgcagcatgcgcgcgccgcggatgcggtggacgagcaccctccacgctcgc
ttcgtccacgccgtcgagctcctcggcggccacgagagggcgacgcccaagtcggtgctg
gagctgatggacgtgaaggatctgaccctagcgcacgtcaagagccatctccagatgtat
cggaccgtgaagagcactgacaagcctgcggcgtcatcagggcccaacgacggcggctcc
ggcgacgaggacttccccggcgccggccaggcggcgtccggcggcgacaacatgtgcggc
gcgaggccgttcggggagcaccggtccacctccgagggcgcggcgagctcggtgggcggc
ggcggcggcggcgacatggaccagtcgtcggccgggaacacgagcaccaggtggagcaac
tcgtcaagggacccatggctgtcgtcgaattcatgcaacatggacgctcatcgcttggca
ggactatcttctccaattgagaacccggagccttgccgatcgagcagctcgcaggtgtcc
aaccacgagatgagtagcccgagcctggagttcacgcttgggagaccggactggcagggc
gcggatcatgactag
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