Setaria viridis (green foxtail): 117846350
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Entry
117846350 CDS
T07951
Name
(RefSeq) ATP-dependent DNA helicase DDM1
KO
K19001
ATP-dependent DNA helicase
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117846350
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117846350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
117846350
NCBI-ProteinID:
XP_034583382
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Position
2:complement(2071143..2077388)
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AA seq
806 aa
AA seq
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MGTLSLSNADSIPTKNWGASPATGPIKQGEERADGFVDASLSLPVESEASDTLHVVKEGE
EQLLEPVKEEKADDDFFDASSSIPIDLEAKNGDASLITEVMKKEEEQLEEARLKVEEEEE
ARRREEAARLAFDPETRYNKLDELLTKTQLFSQFLLEKMDQIADEGVETQAEEPEVEEKK
KGRGRKRKAKPQYNDKKAKTAVAAMLTRSREDRLAENCTLSEEERWEKEQANLVPLLTGG
KLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMHGPYLIIAPLS
TLSNWVNEISRFTPSLASIIYHGDKVARAEIRRKFMPKTVGPDFPIVVTSYEMAMSDAKF
LAHHTWKYVVVDEGHRLKNSKCKLLREMKRITMDNKLLLTGTPLQNNLAELWSLLNFILP
DIFSSHQEFESWFDFSGKGNEEHQEETEEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLP
RKKEIIIYANMTEHQKQIQDHLVEKTFDDYLHEESDIVLKRPGIRSKLHNLLIQLRKNCN
HPDLLESPFDSTTLYPPVEKILEQCGKFQLFVRLLNFLLSQKHKVLIFSQWTKVLDIIEY
YLDSKGLDVCRIDGSVKLEERRRQIAEFNDLNSSMDIFLLSTRAGGLGINLTSADTCILY
DSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRIIKRAFGKLKLEHVVIGKGQF
EQDRSKPNALDEAELLALLRDEQADEDKLIQTDITDEDLLKLMDRSDLCGPPGAADAAPL
IPLKGPGWEVVVPTKSGGGMLSSLTS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggggacgctttccttgtccaacgctgactccatccctacaaagaattggggagcttcc
cctgctacggggccaattaagcaaggggaggagagagctgatggttttgtggatgcaagc
ttgtctctgcctgttgagtctgaggccagtgacacactccatgtcgttaaggagggggaa
gagcagctattggaacctgtgaaggaggagaaggctgatgatgatttcttcgatgcaagt
tcatctataccaattgacctggaggccaagaatggtgatgcatcccttatcacggaagtg
atgaaaaaggaagaagagcagcttgaggaggccaggctcaaggtagaggaagaggaggaa
gccaggaggagggaagaagctgcaagacttgctttcgatcctgagacacggtataacaag
ttagatgagctgctaacgaagacacaactcttttcccagtttcttcttgagaagatggat
caaattgctgacgaaggtgttgaaactcaagctgaagagccagaggtagaagagaagaag
aaaggacgtggccggaagaggaaagcaaagccacagtataatgataagaaggctaagaca
gcagtggcagccatgcttacaagatcccgcgaagatcgccttgcagaaaattgtactctt
tccgaagaagaaaggtgggaaaaggagcaggccaatcttgtgccgttactgactggtggg
aagttgaagtcataccagataaagggtgtgaagtggcttatatcattgtggcagaatggg
ctaaatgggatactggctgatcaaatgggacttgggaaaactatccagacaattggattt
cttgctcatctgaaagggaaaggcatgcatggtccatacttgataattgctcctctgtcc
actctctcgaactgggtgaatgaaatctcgaggtttactccatctctggctagcatcatt
tatcatggagataaggtggcccgggcagagataagaagaaaatttatgccaaaaactgtt
ggccctgattttccgatagttgtgacttcatatgagatggccatgtcagatgctaaattt
cttgctcaccatacgtggaagtatgttgttgtggatgaggggcatcggttgaaaaattct
aaatgcaaattattgagggagatgaagcgcataacaatggataataagctccttttgact
gggacacccctgcagaataatcttgcagagctatggtcactattgaacttcattttgcct
gatatattctcatcacatcaggaatttgagtcgtggtttgatttttctgggaaaggaaat
gaagaacaccaagaagaaactgaagagaagagaagggttcatgttgtttcaaagcttcat
gccattttgcgtccattccttctaaggcgtatgaaggaggatgtagaacagatgcttcca
cgaaagaaagagataatcatttatgccaacatgactgaacatcagaagcaaatccaggat
catttggttgaaaaaacatttgatgactacttgcatgaggaatcagatatcgtattgaag
agacccggcatcaggtcaaagttgcataatctattaattcaactgaggaagaattgcaac
catcctgatcttttggaatctccgtttgattcaacaactttgtatccacctgttgagaag
attctggaacaatgtggcaaattccagctttttgtcaggttactaaatttcctgctctca
caaaagcacaaggttctaatattttcacaatggacaaaagtgttggacattattgagtat
tacctagattcaaaaggccttgatgtttgccgaattgatggtagcgttaaattggaagaa
aggaggaggcagatagcagaattcaatgacttgaatagcagtatggatatttttctcctg
agcacaagggctggtggacttggcatcaaccttacttctgctgatacctgtatcctctat
gacagcgactggaatcctcagatggatttgcaggctatggatcggtgccaccggattggc
caaacacgcccagtgcacgtatataggctggctacttcacattctgtcgagggacggatc
attaaaagagcttttgggaagttgaagctagagcatgtggtgatcggcaagggacagttt
gaacaagacagatcgaagcctaatgccttagatgaggccgagttgctggctttgctgagg
gacgagcaggctgatgaagacaagttaatacagaccgacatcaccgacgaggacctcttg
aagctgatggaccggagtgacctctgcggcccacctggtgctgctgacgcggcgcctctg
atccctctgaagggccctggctgggaggttgtcgtgccaacaaagagcggcggcggcatg
ctctcctcgctcaccagctga
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