Setaria viridis (green foxtail): 117846409
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Entry
117846409 CDS
T07951
Name
(RefSeq) syntaxin-132
KO
K08486
syntaxin 1B/2/3
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117846409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117846409
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117846409
Membrane trafficking [BR:
svs04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117846409
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117846409
Exosomal proteins of other body fluids (saliva and urine)
117846409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Vac_Fusion
ParB
Fusion_gly
Rv1476
COG2p_C
FapA
cas_Cpf1_2nd
DUF6548
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117846409
NCBI-ProteinID:
XP_034583458
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All DBs
Position
2:complement(3690301..3694529)
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AA seq
303 aa
AA seq
DB search
MNNLLSDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESLIAKLTNLLTKLQ
TANEESKAVTKASAMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLSNRQKPGCGKGS
AVDRSREQTTGAVKKKLKERMDDFQALREAIRQEYREVVERRVFTVTGNRPDEETIDDMI
ETGKSEQIFKDAIQQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGD
MINNIETHVSNATNHIQQGVSALQNAKKLQKNSRKWMCYAIIILLVIVVIIVVAVIQPWK
KGA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctcctctcggattcctttgagctccctcggcgggactcttcaagagatgcg
gacattgaaatggggatgcatcaggctgatgcttcagacaacttaaaggatttcttgaaa
aaggttgatgcaattgagagtctaattgcaaagctgacaaatctattgactaagctccag
actgcaaatgaggaatcaaaagctgttacaaaagcaagtgccatgaaagcaattaagcag
cggatggagaaagatattgatgaagtggggaaaattgctcgtcaggcgaagacaaaagtt
gatgaactggaaaaagataacttatcaaataggcaaaaacctggatgcggaaaggggtct
gctgtggaccgatcaagagagcagactactggagcagtgaaaaagaaattgaaggagcgg
atggatgattttcaggctttaagagaagcaattaggcaagagtaccgtgaggttgttgaa
agaagggtttttactgtaactggtaatcgtcccgatgaagagacaattgatgatatgata
gagactggaaaaagtgagcaaatcttcaaagatgcgatccaacaaggaagaggccagata
ctcgacaccgttgctgaaatacaggagcgacatgatgctgtaagggatctagagaggaag
cttcttgagttgcaacagatattcatggatatggcagttcttgttgaggcccaaggagac
atgatcaacaacattgagacacatgtttcgaatgctaccaatcacatacaacaaggcgtg
agcgccctccaaaatgcgaagaaactgcagaagaattcgaggaagtggatgtgctatgcc
atcatcatactgctggtgatagtggtgatcattgtggtggccgtcatccagccatggaag
aagggtgcttag
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