Setaria viridis (green foxtail): 117846465 Help Entry 117846465         CDS       T07951                                  Name (RefSeq) uncharacterized protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism svs  Setaria viridis (green foxtail) Pathway svs04148   Efferocytosis Brite KEGG Orthology (KO) [BR:svs00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     117846465  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:svs04131]     117846465 Membrane trafficking [BR:svs04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     117846465 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_Vps8 Beta-prop_VPS8 VPS8_N TPR_VPS8_2 WDR55 Beta-prop_EML_2 Beta-prop_EML TPR_Vps41 WD40_CDC20-Fz Beta-prop_HPS5 WD40_WDHD1_1st Clathrin ANAPC4_WD40 Beta-prop_TEP1_2nd WD40 WD40_Prp19 Beta-prop_IFT140_1st zf-RING_Vps41 zf_RING_Vps8 zf-RING_2 Motif Other DBs NCBI-GeneID:  117846465 NCBI-ProteinID:  XP_034583529 LinkDB All DBs Position 1:8856403..8868676 Genome browser AA seq 1913 aa AA seqDB search MPSSPAMASQHPPPRQELDLDAFLPSSPTSSTSSDADADHRRAVDDLLFLLSSSDSDSEE SAPVPSTSSRALPRVQAPEPPAEPSPLRSPPASPSPRRSTSAAPSETLSSLVARTFSGNG ASSSYSKPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRSVSAPVEKLLEE GSGSEASEELPSTGSLEAEVEEKGNSEVVPEPTEQTASGSGTEEFEEGKHVEVETEESSE SMKLVEASTLDSVVADDFSGHEQTAENGSMVETDQVENQTAVVYEENAYDQTGDDNYVQS AQSMDPIGSVSEESFDDDREADRSNSIIEDQVESESLIDNVIKERMEQLEVSRKAEKNAE KKQKVSMKPLELAEELEKRQASFGQHWEEGAAAQPMQLEGIGKGPPAIGYMQIEMDNPVT RAMSSPSFRPDHGSPQVLAVHRSYIAMGTSKGAVIVIPSKYSIHQADDTDAKMLFFWNQG EKTQSPVTAMCFNQQGDLLLVGYGDGHMTIWDVQKATAAKVIYGEHTAPVVHVCFIRQSK AITGDSKGVVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLLVDESFGFSNSSSQ GNQTTSSGGGGLGSMMGGVVGGVVGVDSGWKFFNESSSTVEDGVVVMFIMYQHALVVRLR TNIDHVDHIETFSRPDGAREGSIAYAAWKYTSSLNDSSSLDEERLSWLALAWDRQVQVAK FVKSKIVKHKEWKLDSAAIGVAWLDDQMLVVLNLRGQLCLFSKDGSELRRTTFVPDGLLF DDTILHHAHFSNRFGNPEKHFNSSVAVRGATVYILGPTFLTVSRLLPWKERIEALKRAGD WMGALDMAMRLYDGQTQGVVDLPRTVDSIREAIMPYLVELLLSYISYVFEYISIALSNHT GKGGDSDVLIEADRSLLTQREEQYARVGGVAVEYCVHIGRDDILFDTVFSKFVAAQSGGM FLEVLEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFNQVVRLCR EHGLYGALIYLFNQGLSDFRTPLEELLSVVQNRNRKDAASTGYRMLVYLKYCFQGRAFPP GHGIIPRSRLHSVREELLQFLLEESKSLTSEVFKGFNASCGKCPNICYLLWMDTEATLEV LKCAFAQDSFEPGDEPSSTVNASVSEDEDGIIAENPGSQNNMVQNVLDDIIDIVGLENEV IRSVVMGTDDSEFWPSEKEFGYLIEFVSFFVSHKRAIASKRVVMHILTYLTSSYDDTRAR TQKEKEVLQLFNALPQNDWNSDFVLNLCSDAHFHQACGLIFTTRNQNLSALDSYMKDRDE PFHAFIFIDKRLFELADDEALSFRTTVISRFPELVKLSRECAFVLVIDHFCDNIQQILAE LRSDPHSLFLFLKTAIEVHLSGKLDFSGLSLRSNQTVELHYSSSDLEDYQKRLSNPSKLD HNPVSVDDELVELYLELLCQYERRSVLKFLETFDSYRLERCLHLCLDYGVTDAAAFLQER VGDVGSALALILAGLDEKISLFISSVENTFSGVASKSISETKQPDIVLEMSEAHPVLDAL RASIGLCQRNSQRLDPEESQSLWFQLLDSFSEPLKRLYGSQDVNEKSARSKGMEAPIEHL KGKRPSQQMRISAKQRCLNVLRKIFSQFVGEIIEAMAGYIPLPAIMAKLLSDNGSQEFGD FKFVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFACCICNCSLS KEGAISAIRLFSCGHATHLQCESEQSRSSNRESKDGCPVCLSTSNTQGRNKSPMFDNGLV KYSGAELEASHGVHQTHEIDHAERSRGLQNMSRYEILSNLQKEQKSFHIETVPPLKLAPP AIYHEKIQKRTSLVGEPSKHSVRSQKPQKIWQMKEQKSKQAGNRLPQKSSVLR NT seq 5742 nt NT seq  +upstreamnt  +downstreamnt atgccgtcgtcgccggcgatggcgtcgcagcacccgccgccgcgtcaggagctcgacctc gacgcgttcctcccctcctctccaacctcctccacgtcctccgacgccgacgctgaccac cgccgcgccgtcgacgacctcctgttcctcctctcctcgtcggactccgactccgaggag tccgcccccgtccccagcaccagcagccgagccctaccccgcgtccaagccccggagccg cccgccgaaccctcgccgctgcgttccccgcccgcgtcgccgtccccgaggagatccaca tccgccgcgccgtcggagaccctctcctccctcgtcgcgagaaccttctccggcaacggc gcctcgtcttcctactcgaagccgcttccctcgctcttccgcggcgtccgtcccagcccc aagcccggcgccgcgctagccgccgctgccgcggcatcccgcgcggtccttaccccgcac gcggctgcaatcaagtcccgccgatcagtctcggcacccgtcgagaagctcctggaggag ggcagtggctccgaggcctccgaggagctcccttccactggaagcttggaagcagaggta gaagaaaaggggaactcggaagtggttcctgaaccgacagagcaaactgccagtgggagt gggactgaagaatttgaagaggggaaacatgtggaagtggaaactgaagagagttctgag tctatgaagctggtggaggcgagtacccttgattctgtagtcgctgatgatttcagtggg catgagcaaacagctgaaaatggcagcatggtggaaactgatcaagttgagaaccaaact gcagttgtctatgaggaaaatgcatatgaccaaactggagatgataattatgtgcaatca gctcagagtatggatccaattgggtccgtttctgaggaaagttttgatgatgatcgggag gctgacagatccaacagcatcatcgaagaccaagtggaatctgagagtttaattgataat gtgatcaaggagagaatggagcagctggaggtcagcaggaaggctgagaagaatgcagag aagaagcagaaagtgtcaatgaaaccgttggagttagcagaggagcttgagaagaggcag gcctcgtttggtcaacactgggaggaaggagcagctgcgcaacccatgcaattagagggg atcggaaagggcccaccagctattggttacatgcaaatcgagatggacaacccagtaact cgtgccatgtcctccccgtcatttaggccggaccatggctctccccaggtgctggcagtt cataggagctatatagcgatgggcacgtctaaaggtgctgtcattgtcattccaagcaaa tactccattcatcaagctgatgatacagacgcaaagatgctgttcttttggaaccaaggt gagaagactcaatcaccagtgactgccatgtgctttaaccagcaaggggatcttctgcta gtaggatatggtgatggtcatatgacaatttgggatgtacaaaaagctacagcagcaaaa gtcatatatggtgagcatacagcaccagtagtgcatgtttgttttatccgccaatctaag gccatcactggggattcaaaaggggtagttctgttgcacacattttccattatcccagta attaatcgtttgactgtcaagggaacccagcgcctttttgatggaaatactggaattgtg ctctcagcctgtcctcttctagtggatgaatcctttggttttagcaactcatcttcccaa gggaaccaaacaacttcctccggtggtggtggtcttggcagcatgatgggtggtgttgtt ggaggtgtagttggagtagattctggatggaagtttttcaatgaaagctcctccacagtg gaggatggtgttgtggtcatgtttattatgtaccagcatgctcttgtggttaggctccgt accaatattgaccatgttgaccatattgaaacgttctctagaccagatggagcacgagaa ggctccatcgcgtatgctgcatggaagtatacatcatccttgaatgattcatcatcatta gatgaagaacggctatcttggcttgcacttgcatgggaccgccaagtgcaagtggcaaaa tttgttaaatcaaagatagttaaacacaaggaatggaagcttgatagtgcagctattggt gttgcctggttagatgaccagatgttagttgtccttaatttgagaggacagctctgtttg ttctctaaagatggcagtgagcttcgtagaactacctttgttccggatggccttctgttt gatgacaccatattgcaccatgcacatttttctaacaggtttggtaacccagagaagcat tttaatagttcagtagcagtaagaggtgctacagtgtacattcttggcccaacctttctc acagtttcacgacttctcccatggaaagaacgaattgaagcactaaagagagctggtgat tggatgggtgcactggacatggcaatgagactttatgatggtcagacacagggtgttgtt gatctcccgagaacagttgattctattagagaggccataatgccatacttagtagagttg cttctatcatatataagttatgtcttcgaatatatttcaattgcattgtcaaatcatact ggaaaagggggagactcagatgttcttatagaggctgataggtctctgctaacacaaaga gaggaacaatatgctcgtgtaggaggggttgcagtcgagtattgtgtgcatattggacgt gacgacatccttttcgacacagtcttctctaagtttgttgcggcacaaagtggaggcatg tttctggaggtactagagccctatatattgaaggatatgcttggttctctgccccctgag attatgcaagcactagtggagcattatagtggcaaaggatggttgcagcgagttgaacaa tgcattcttcacatggatatttcttcattggattttaatcaggtggtcagactgtgtcgt gaacatgggctatatggtgcactaatttatttgtttaaccaaggtctgagtgatttccgt acacctctagaggaacttctatcagtcgttcagaatagaaacagaaaagatgctgcttct actggatacaggatgcttgtttatctgaaatattgctttcagggccgagcatttccccca gggcatgggataattccccgatcccgccttcattcagtgagggaagaactgctgcaattt ctgcttgaagagtctaagtcactcacttctgaagtatttaagggtttcaatgcttcttgt ggaaagtgcccaaacatatgctatcttctttggatggatactgaagctaccttggaagtt ctcaaatgtgcttttgcacaggatagttttgagcctggagatgaaccttctagtactgtc aatgcatctgtctcagaggatgaagatggcattatcgctgaaaacccagggagtcaaaat aatatggtacaaaatgtattggatgacatcattgacattgttggtttggaaaatgaggtg attcggtctgttgttatgggtacagatgactcagaattttggccttcagagaaggaattt ggctatttaatcgagttcgtgtccttttttgtttcccacaaaagggctattgcatctaaa agagttgttatgcacattctcacttatctcacttcgtcttatgatgatacaagagcaagg actcagaaagaaaaggaagtgcttcaactcttcaatgcacttccccaaaatgactggaat tctgattttgtcttgaacctctgttcagatgctcattttcatcaggcctgtggtttgata tttacaaccaggaatcagaatttatctgctttagatagttacatgaaggatagagatgaa cctttccatgcttttatcttcattgataaaaggttatttgaattggctgatgatgaagct ttgtcatttcgtaccactgtaatatctcgttttcctgagttggtcaagctgagcagggaa tgtgcatttgtcttagtcattgatcatttctgtgataatatccagcaaatattagcagag cttcggtctgatccacacagcctctttcttttcttgaaaactgctattgaagtacacttg tcaggaaaacttgacttcagtgggcttagtctaagaagcaatcaaactgttgaacttcat tactcttccagtgatcttgaagattatcagaagaggttatcaaatccctccaagttagac cacaatcctgtttccgttgacgacgagttagttgaactatatctggagctattgtgtcag tatgagcgaagatcggttctgaagtttctggagacttttgacagttacagattagagcgg tgcttgcatctttgcctagattacggagttacagatgctgctgcatttttgcaagagagg gttggtgatgttgggagtgcccttgcacttatcctggctggacttgatgagaaaatcagc ttatttatctcttctgtggaaaatactttctctggtgttgcatcaaaaagtatctctgag actaagcaaccagacattgttctagaaatgagtgaggctcatccggtgcttgatgcttta cgtgcctccattgggttgtgccaaagaaattcacaacgcttggacccagaggaatctcag tccctttggttccaactgcttgactccttctcagagccactgaaaagattgtatggaagc caggatgtaaatgaaaaaagtgccaggtccaaggggatggaagcaccaattgaacatctg aagggaaaaagaccatcacaacaaatgaggatttcagccaaacaaaggtgcctaaatgtt ctgcggaaaatattttcacaatttgttggagaaataatagaggcgatggctgggtatata cccctaccagcaataatggcgaaactcttatctgataatgggagtcaagagtttggtgat ttcaaatttgtgatacacagaatgttatctatgtatctttatgaaaaaagaatactggaa acagctaagtcagtaattgaggatgactcgttttataccttgagcttattaaagagagga gtttgtcatggatttgctccacagacttttgcatgttgcatatgcaactgctcactttct aaagaaggtgctatttcagccatacggttgttcagttgtgggcatgcaacacatcttcag tgtgagtctgagcagagcaggtcatccaatcgggaatctaaagatggatgccctgtctgt ctctcaactagtaatacgcaaggccgaaacaaatcgcctatgtttgataatgggctagtg aagtattctggggctgaacttgaagcgtcgcatggcgtccatcagactcatgaaattgat catgctgagagatctcgcgggcttcaaaatatgtcacggtatgaaatactgagtaatctt cagaaagaacagaagtccttccatatagaaactgtacctccattgaaacttgcaccacca gctatatatcatgagaagatacagaagaggacctctttggtgggagaacctagcaaacat tcggttagaagtcaaaagccccagaaaatatggcaaatgaaggagcaaaaatcaaaacag gctgggaatcgtcttccgcaaaagtcaagtgtgctccgttaa

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