Setaria viridis (green foxtail): 117846487
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Entry
117846487 CDS
T07951
Name
(RefSeq) protein SHORT-ROOT 1
KO
K27743
protein SHORT-ROOT
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117846487
Transcription factors [BR:
svs03000
]
Eukaryotic type
Other transcription factors
GRAS
117846487
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Imm49
Gly_rich_2
Motif
Other DBs
NCBI-GeneID:
117846487
NCBI-ProteinID:
XP_072147714
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Position
2:43155680..43158459
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AA seq
594 aa
AA seq
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MDTLFRLVSLQASENEKQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSSGG
GGGGGQYYYGQQHQHQQYYLEPYQQEECGNAHHLYMDEDFSSSSSSRQHFHSHGAAVQPP
TSSVTTAPTPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAAVGG
GGSGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGEVEQKLASYFLQGLFARLT
ASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASP
EPQRFHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMREI
GQRMEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGGASTALAVNCVNSLRGVVPGG
ARRRDAFTSSLRRLDPRVVTVVEEEADLVASDPDTSSEEGGDSEAAFLKVFGEGLRFFSA
YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPV
AFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWKP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctatttaggttggttagcctccaagcctccgagaacgagaagcagcagcag
cagcagcagcagtcggcgtcctacaactcgaggagcaccacgtcgagcggctccaggtcg
tcgtcgcaccagaccaacgcctcctacaactactactaccacagcaacagcagcggcggc
ggcggcggcggcgggcagtactactacggccagcagcaccagcaccagcagtactacctg
gagccgtaccagcaagaagaatgcggcaacgcccaccacctgtacatggatgaagacttc
tcctcctcgtcctcgtcgaggcagcacttccactcgcacggggcggcggtgcagccgccg
acgtcgtccgtgaccacggcgccaacgcccccgctgtccacgtcgtccacggccgcgggg
gcggcgcacgcgctgttcgaggcggccgacctgtcgttcccgcccgacctcaacctcgac
ttctcgtccccggcgtcatcgtccggcgggggcgcggcgtcgtcggcggccgtcggggga
ggaggcagcgggaggtgggcgagccagcttctgctagagtgcgctcgggcggtggcggcg
cgggacagccagcgcgtgcagcagctgatgtggatgctcaacgagctggcgtcgccgtac
ggggaagtggagcagaagctggcctcctacttcctccaagggctcttcgcgcggctcacg
gcgtccgggccgcggacgctgcgcacgctcgcggcggcgtccgaccggaacacgtcgttc
gactccacgcggcgcacagcgctgcggttccaggagctcagcccgtggtcgtcgttcggt
cacgtggccgccaacggcgccatcctggagtccttcctcgaggccgccgcggcgtcgccg
gagccgcagcggttccacatcctcgacctcagcaacacgttttgcacgcagtggccgacg
ctgctcgaggcgctcgccacgcggtccgccgacgacacgccgcacctgtccatcaccacc
gtggtgtccgccgcgccgtccgcgccgacggccgccgtgcagcgcgtgatgcgggagatc
ggccagcggatggagaagttcgcgcggctcatgggcgtgcccttcagcttccgcgccgtg
caccacgccggggacctcgcggagctcgacctcgacgcgctcgatctgcgcgacggcggc
gcctccaccgctctcgccgtcaactgcgtcaactcgctgcgcggcgtggtgccgggcggt
gcccgccggagggacgcgttcacctcgtccctccggcgcctcgacccgcgggtcgtcacc
gtcgttgaggaggaggccgatctcgtggcttctgaccctgacacatcgtccgaggaaggc
ggcgactcggaggcggcgttcttgaaggtgttcggcgagggcttgcggttcttctcggcc
tacatggactctctcgaagagagcttcccgaagactagcaacgagaggctggcattggag
aggggagccggacgtgccatcgtggatttggtctcgtgcccggcgtccgagtccatggag
cggcgggagacggcggcgtcatgggcgcgccgcatgcggtcggccggcttctctccggtg
gcattcagcgaggacgttgccgacgacgtgcggtcactgctccgccggtaccgggagggt
tggtcgatgcgggatgccggtctagacgactcggcagccggagcaggcgtcttcctcgcg
tggaaggagcagcctctcgtgtgggcaagcgcgtggaagccatga
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