Setaria viridis (green foxtail): 117846495
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Entry
117846495 CDS
T07951
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117846495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117846495
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117846495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
EIF3I
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
117846495
NCBI-ProteinID:
XP_034583576
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All DBs
Position
2:5468005..5472436
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AA seq
398 aa
AA seq
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MGSGGGEEASAAGGGKVACAAWIRRRDEKAAAARVFAAHARAGAAGSLPAVEVLGFDSKE
CSLSPEPLARAVLGEGGAGDAPHGIAVHPAGDELVCATAKGCRLFKLIFEEFTVRIIPRD
APPLESVGPQKCLAFSTDGAKFAIGGEDGHLRIFHWPTMNVLLDEPKAHKSFRDMDISLD
SEFLVSTSIDGSARIWKIDEGTPLVNLTRSSDEKIECCRFSRDGMKPFLFCTVAKGSKVV
TVVWNISDWKRIGYKRLLGKPISTLSVSLDGKYLALGSHDGDFCAVDVKKMEVSHWSKKA
HLGSPVTSIEFCPTERVVISTSNQWGAELTKLNVPADWKEWQVWLVLLALFLASAVLFYM
FYERSDSFWKFPMGRHQPAKPWSVLKESPPVPEDQTPW
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcggcggcggcgaggaggcttcggctgcggggggagggaaggtggcgtgcgcg
gcgtggatccggcgccgggacgagaaggcggcggcggcgcgggtgttcgcggcgcacgcc
cgggcgggtgcggcgggctcccttcccgcggtcgaggtgctcggcttcgactccaaggag
tgctccctctcccccgagcccctggcgagggccgtgctcggggagggcggcgcgggcgac
gcgccgcacggcattgcggtgcaccccgccggcgatgagctcgtctgcgccacggccaag
ggctgcaggttattcaaactgatttttgaagagttcaccgttcgcattattccaagagat
gccccacctctagaatctgttggaccacagaagtgtcttgctttcagcacagatggtgcc
aaatttgccattggtggagaggatggacatctcagaatattccattggccaaccatgaat
gtgctcttggatgagcctaaagctcataagtccttccgagacatggatatcagcttagac
tcggagtttctagtttcaacatccattgatggatctgcaagaatatggaagatagatgag
ggcacaccactggttaatttgactcgatcctcggatgagaagatcgagtgttgtcgcttt
tctagagatggcatgaagccattcctgttttgcacagttgcaaaaggttccaaagttgtt
actgttgtctggaacataagtgattggaagagaattgggtacaaaagacttctgggaaag
cctatctccacactttcagtaagcttggacggaaagtatctggcattaggaagccatgat
ggtgacttctgtgctgttgatgtaaagaaaatggaagtttctcactggagcaagaaggct
catcttggttccccagtcacatccattgagttctgtcctactgaaagggttgtaatctcc
acatccaatcaatggggagcagagctaacgaaactgaacgtgcctgctgactggaaagaa
tggcaggtctggctcgtgctcctggctctcttcctggcatctgccgttctgttctacatg
ttctatgagcgctcggactcattctggaagttccccatggggcggcaccagccggccaag
ccctggagcgtgctgaaggagtcccctccggtcccagaggaccagactccatggtga
DBGET
integrated database retrieval system