Setaria viridis (green foxtail): 117846512
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Entry
117846512 CDS
T07951
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03010
Ribosome
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117846512
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117846512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
svs03011
]
117846512
04121 Ubiquitin system [BR:
svs04121
]
117846512
Ribosome [BR:
svs03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117846512
Archaea
117846512
Ubiquitin system [BR:
svs04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117846512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
Plexin_RBD
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
117846512
NCBI-ProteinID:
XP_034583604
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Position
2:39740423..39742072
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AA seq
136 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN
IQKESTLHLVLRLRGGGRGGYPTMRVPWDLINLARKHNEKKMICRKCYARLHPKATNCRK
KKCGHSNALRVKKKLM
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgctgacggggaagacgatcacgctcgaggtcgagagcagc
gacaccgtggaaaacgtcaaggccaagatccaggacaaggaaggcatcccgccggaccag
cagcggctcattttcgccgggaagcagctggatgacggccgcaccctggccgactacaac
atccagaaggagtccacgctgcacctggtgctccgcctccgcggcggcggcaggggcgga
taccccaccatgcgcgtcccgtgggacctcatcaaccttgcccgcaagcacaatgagaag
aagatgatctgccgcaagtgctacgcacggcttcaccccaaggccaccaactgccgcaag
aagaagtgtggccacagcaacgcgctgagggtaaagaagaagctcatgtga
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