Setaria viridis (green foxtail): 117846541
Help
Entry
117846541 CDS
T07951
Name
(RefSeq) 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform X1
KO
K23558
plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase [EC:
1.1.1.418
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00100
Steroid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
117846541
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.418 plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
117846541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3Beta_HSD
Reticulon
Epimerase
NAD_binding_10
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
117846541
NCBI-ProteinID:
XP_034583639
LinkDB
All DBs
Position
2:complement(36080035..36084403)
Genome browser
AA seq
566 aa
AA seq
DB search
MATAEAGPTTGKPACAVTFGRSTLLGRHLAAALAASGRWSAVAVVDPSPSPPPPPASPLV
RHHAVDLSDPAGLASALAGAAAVFHVDATTAAASGSDGSFLSLHRLAAEGTRRLLAACRA
SGVGRVVYTGSADVVAAGARDVVNADEDSAPYPDKFGNAVSELRAQVEMMVLGADGVDGM
RTCVLRPSNMFGPGDSSLLRFVAGYARSPLGKFVIGGGSNMSDFTYVENVAHANICAEQA
LCSNAASVAGKPFFVTNDEPMETWEFMNCIMEAMGCQRPRINLPAKMLLSAALFSNMIRH
RLGFQMFSTPLLHPDTIYFLSCTRTFNTSKARRLLGYYPIVSLEDGIMRTVRSFSELSDN
LGFSRKQRSCGSSKADKLLGSGTAADILLWRDEKRTFSFVTVLFLLFYWFLLSDRTFVSS
AAKFLLVTSLALFIHGVLPSQVFGFTVEKVTSDHFEVSHSALRNSLMCLASAWNGGIHKL
RVLAEGEDWSTLLKVFAFLYSIKLLLNFQFRFLMGLVLASLFIVFIVYEQCEEEIDSLVS
NASFKIKWLMDRVVERMPASLKAYIS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgaggccggcccgaccacgggcaagcccgcctgcgccgtcaccttcggc
cgctccaccctcctcggccgccacctcgccgccgcgctcgccgcctcgggccgctggtcg
gccgtcgccgtcgtcgacccctccccttccccgcccccaccgccggcctcccccctcgtc
cgccaccacgccgtcgacctctccgaccccgcgggcctcgcctccgcgctcgccggagcc
gcggccgtcttccatgtggacgcgaccaccgccgccgcctccgggagcgacgggtccttc
ctctccctccaccgcctcgccgccgagggcacgaggcggctcctcgcggcctgccgcgcg
tccggcgtggggagggtggtgtacacaggctcggccgacgtggtggccgccggcgcccgg
gatgtggtcaatgccgacgaggactccgcgccctaccctgacaagtttgggaacgcggtg
agcgagctgagggcgcaggtggagatgatggtgctgggtgcggacggggtggacgggatg
cggacatgcgtgctgcgcccgagcaatatgttcgggcctggcgattcgagcctgctgagg
tttgttgctggatatgcaaggtctcccttgggcaagtttgtaataggtggtggcagtaac
atgtctgactttacctatgtggaaaatgtggcccatgccaatatttgtgctgagcaagcc
ttgtgttcaaatgcagcttctgttgctgggaagccattttttgttaccaatgatgaacct
atggaaacatgggagtttatgaattgcataatggaagctatgggctgtcagaggcccagg
attaatcttcctgccaagatgttattgtctgcggccttgttctccaatatgattcgtcac
aggcttggttttcaaatgttttccactcctcttctgcatccagatacaatatacttcttg
tcatgcacaagaacttttaacacttcaaaagctagaagattacttgggtactacccaatt
gtatcattggaggatggaattatgagaactgtcaggtcattttcagaactatcagataat
ttgggtttctcgaggaaacagcgctcctgtggatcatcgaaagcagataagctgttagga
agtggaacagctgctgatattcttctttggagggatgaaaagagaaccttttcatttgtg
acagtattgtttctgcttttctactggttcctgctttcagacagaacttttgtttcgtca
gctgccaaatttcttctagtgacctcccttgctcttttcatccatggtgtgctgccgtca
caagtgtttggttttacagttgagaaagttacttctgatcattttgaagtatcacactca
gcattgaggaattcactgatgtgcctggcttctgcatggaatgggggcattcataaactg
agggttctagcagaaggcgaagactggagtacccttttaaaggtatttgcatttttgtac
agcatcaagctattgttgaactttcaattcagatttctgatgggtcttgtattggcatcc
ttgttcattgtcttcatagtctatgaacaatgcgaggaagaaattgacagcttggtgtca
aatgcttctttcaaaatcaagtggctaatggacagagtagtcgaacgcatgccggcgtct
ttgaaggcatatatatcctag
DBGET
integrated database retrieval system
