Setaria viridis (green foxtail): 117846621
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Entry
117846621 CDS
T07951
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117846621
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
117846621
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Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
DUF5031
Motif
Other DBs
NCBI-GeneID:
117846621
NCBI-ProteinID:
XP_034583739
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Position
2:28403447..28408538
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AA seq
561 aa
AA seq
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MAIECLVLGAGQEVGKSCVVATIAGKRVMFDCGMHMGYHDRRHYPDFARALAAWGALDFT
SALSCVVITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPFMLEDYRKVTMDQRGEA
EQYSYEDILRCMKKVIPLDLKQTVQVDKDLVIRAYYAGHVLGAAMIYAKAGDAAMVYTGD
YNMTPDRHLGAAQIDRLKLDLLITESTYAKTIRDSKHAREREFLKAVHKCVSGGGKVLIP
TFALGRAQELCMLLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKDSHAVHN
SFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEAFKKWAPSEKNLITLPGYCVAGT
VGHKLMSGKTTKIVLDKDTHIDVRCQIHQLAFSPHTDSKGIMDLTEFLSPKHVILVHGEK
PQMAFLKERIESELGMPCFYPANNESVSIPTTHTLKMSTTERFITSCAAEQGKQSLRKRN
LIHGTGASEVNGSDEAAAEGVLVMEKHKAPKILCEDELLQVLGMERHLVQFEAMGSSRIE
AAVEWELKRAEAADLGSEENE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgagtgcctcgtgctaggggcggggcaggaggtggggaagagctgcgtggtg
gcgaccatcgccgggaagcgggtcatgttcgactgcggcatgcacatgggctaccacgac
cgccgccactacccggacttcgcgcgcgctcttgccgcctggggcgcgctggatttcacc
agcgccctctcctgtgtcgtcatcacgcacttccacttggatcatattggggcgctgccc
tacttcactgaggtctgcgggtaccacggccccatctacatgacgtatcctacaaaggct
ttagctccatttatgctggaggattatcggaaagtaacgatggatcagagaggggaggca
gagcaatatagctatgaagatattcttaggtgtatgaagaaagtcatacccttggacttg
aagcagactgttcaagtagataaagaccttgtgattcgtgcatattatgctggacatgtt
ctaggggctgccatgatttatgcaaaagctggagatgctgctatggtctacaccggagat
tacaatatgacaccagatagacatcttggggctgcacaaatcgatcgtctcaaattggat
ctcttgataacagagtccacatatgctaaaactatacgtgattcgaagcatgcccgagag
agggagttcctaaaagcggtacataaatgtgtttctggagggggtaaagttctgattccg
acatttgctctgggaagagctcaggagctatgtatgttactggatgactattgggagagg
atgaacttgaagattcctatttacttctcagctggtttaaccattcaagctaacatgtac
tacaagatgcttatcggatggaccagccaaaagatcaaggatagtcatgcagtgcataat
tcatttgacttcaagcatgtttgccactttgagcgttcattcatcaacaaccctggtccc
tgtgtactttttgcaacacctgggatgattagtggtggattttcccttgaggcatttaag
aaatgggcgccatcagagaagaatctgattacacttccaggttattgtgttgctggaacc
gttggtcataagttgatgtctgggaaaactacgaagattgttttagacaaggacacccat
attgatgtcagatgtcagatccatcagctagcattcagtcctcacacagactccaaaggg
atcatggatctgactgaatttctttcacccaaacatgtaattcttgtccatggtgaaaag
cctcagatggctttcttgaaggagaggatcgaatctgaattggggatgccgtgcttttat
ccagctaacaatgagtctgtctccataccaacaacccatactctcaaaatgagcaccacc
gagaggttcattacaagctgtgctgctgagcaaggtaaacagagcctgcggaagcggaat
ctgattcatggtactggtgcgtcagaagtgaatggcagtgatgaggctgctgcggagggt
gttctggtgatggagaaacacaaggctccaaagattttgtgtgaggatgagcttctccag
gtgctgggcatggagcgtcatcttgtccagtttgaagcaatgggctcctctagaattgaa
gcggctgttgaatgggagctgaagcgggccgaggcagccgatttaggtagtgaggaaaat
gagtga
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