Setaria viridis (green foxtail): 117846802
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Entry
117846802 CDS
T07951
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00906
Carotenoid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117846802
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svs01006
]
117846802
Enzymes [BR:
svs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
117846802
Prenyltransferases [BR:
svs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
117846802
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
117846802
NCBI-ProteinID:
XP_034583783
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Position
3:49393670..49396632
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AA seq
407 aa
AA seq
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MAGSSAVWAAQHASCRPHHHQPTSPSQRPRARLVPLPPRRGGASLARPGASLAAAAAATA
APVVRTVSEEAVYEVVLRQAALVQEGSGRVVKEGAAARRRQRPRWAEEKEEEGIVGWGLL
GDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPTAL
DRWEKRLEDLFEGRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYMTFDELY
LYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDARRGRI
YLPLDELAQAGLTEDDIFRGKVTDKWRGFMKGQIKRARLFFDEAEKGVAHLDSASRWPVL
ASLWLYRQILDAIEANDYNNFTKRAYVGKAKKLMSLPVAYARAAVAS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctcctccgcagtctgggccgcgcaacacgcctcctgcaggccccaccaccac
caaccgacgtccccgtcgcagcggccgcgggcgcgccttgtcccccttcccccgaggcgg
ggcggagcctccctcgcgaggccgggcgcgagcctcgccgccgccgccgccgccaccgcg
gcgcccgttgtgaggaccgtgtctgaggaggccgtctacgaggtcgtgctgcggcaggcg
gcgctcgtgcaggagggcagcggcagggtcgttaaggagggggcggcggcgcggcgccgg
cagcgcccgcggtgggcggaggagaaggaggaggaggggatcgtcggctggggcctcctc
ggcgacgcctacgaccgctgcggcgaggtctgcgccgagtacgccaagaccttctacctc
ggcacacagcttatgactcctgaaaggcgcaaagcagtctgggcaatctatgtatggtgc
agaagaactgatgaactagtggatggtcctaacgcgtcctacatcacaccgactgctctt
gatcggtgggagaagcggttagaagatctctttgaaggccgcccgtatgatatgtacgat
gcagccctctcagacacggtgtccaagtttccggtagatatccagccattcaaagatatg
attgaaggaatgaggcttgacttgtggaagtcgaggtacatgacctttgacgagctctac
ctctactgctactacgtcgccggcacagttggcctcatgacagttcctgtgatgggcatc
gccccggactcaaaggcctcaactgagagcgtgtacaatgctgcgctagctcttggcatc
gctaaccagctgacgaatattctcagagatgtaggcgaagatgcaaggagagggagaata
taccttccactggacgagcttgcacaggcaggtctgacagaagatgacatattcagaggg
aaagtgaccgataagtggagggggttcatgaagggccagattaaacgtgccaggttgttc
ttcgacgaggctgagaagggcgtggcccatctagactctgcgagcagatggccggttctc
gcgtctctgtggctgtacaggcagatcctcgacgccattgaggcgaacgattacaacaac
ttcaccaagcgtgcctacgtaggcaaggcgaagaaattgatgtcgctgccggttgcatac
gcaagagcagctgttgcatcatga
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